RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SLC25A34Q6PIV7 304 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OR52M1Q8NGK5 317 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 HSD17B10Q99714 261 aaKnown RBP9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 CXXC4Q9H2H0 198 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 HES4Q9HCC6 221 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 CISD1Q9NZ45 108 aaKnown RBP9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 PSG11Q9UQ72 335 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 RNF115Q9Y4L5 304 aa9.78□□□□□ -0.84
NPC1L1-201ENST00000289547 OTX1P32242 354 aaPredicted RBP9.77□□□□□ -0.84
NPC1L1-201ENST00000289547 BIVMQ86UB2 503 aa9.77□□□□□ -0.84
NPC1L1-201ENST00000289547 CCL17Q92583 94 aa9.77□□□□□ -0.84
NPC1L1-201ENST00000289547 CHST5Q9GZS9 411 aa9.77□□□□□ -0.84
NPC1L1-201ENST00000289547 SVILO95425 2214 aa9.77□□□□□ -0.84
NPC1L1-201ENST00000289547 E9PLN8 166 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 CORTO00230 105 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 LMX1BO60663 402 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 CLDN14O95500 239 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 SRP19P09132 144 aaKnown RBP9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 FABP2P12104 132 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 OR8A1Q8NGG7 326 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 VKORC1Q9BQB6 163 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 RBKSQ9H477 322 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 CNIH1O95406 144 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 CLEC3BP05452 202 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 NUTF2P61970 127 aaKnown RBP9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 OR5R1Q8NH85 324 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 COL4A4P53420 1690 aaPredicted RBP9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 FGF16O43320 207 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 PSG2P11465 335 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 FOLR2P14207 255 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 HES1Q14469 280 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 ZNF506Q5JVG8 444 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 SAP30LQ9HAJ7 183 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 TINAGQ9UJW2 476 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 TIMM9Q9Y5J7 89 aa9.77□□□□□ -0.85
NPC1L1-201ENST00000289547 ASXL3Q9C0F0 2248 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 A0A1B0GV72 72 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 CRYM-AS1A6NIL9 109 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 GFI1BQ5VTD9 330 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 ZNF519Q8TB69 540 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 MPC1Q9Y5U8 109 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 AHCTF1Q8WYP5 2266 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 A1L4Q6 167 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 SMPD2O60906 423 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 CA6P23280 308 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 CACNA1EQ15878 2313 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 A0A1W2PPE3 182 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 A6NNC1 897 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 KBTBD11O94819 623 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 FCGR3AP08637 254 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 ZNF137PP52743 207 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 NIT1Q86X76 327 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 GTF3AQ92664 365 aaKnown RBP9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 OR2H1Q9GZK4 316 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 FZR1Q9UM11 496 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 U3KQA8 63 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 ICE1Q9Y2F5 2266 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 TRAV38-1A0A0B4J264 116 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 CXorf1O96002 111 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 RIPPLY2Q5TAB7 128 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 GPX7Q96SL4 187 aaPredicted RBP9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 NDFIP1Q9BT67 221 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 NCOR1O75376 2440 aa9.76□□□□□ -0.85
NPC1L1-201ENST00000289547 DOCK4Q8N1I0 1966 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 TFPI2P48307 235 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 OR8B3Q8NGG8 313 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 OR2T6Q8NHC8 308 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 OR8B2Q96RD0 313 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 KIAA1671Q9BY89 1806 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 A0A087WWC5 75 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 MDP1Q86V88 176 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 OR2V2Q96R30 315 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 WNT10AQ9GZT5 417 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 IGHV3-43A0A0B4J1X8 118 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 DLEU1O43261 78 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 IGHV3-43DP0DP04 118 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 SRIP30626 198 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 NMUP48645 174 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 GNB1P62873 340 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 ZNF385AQ96PM9 386 aaKnown RBP9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 TMEM222Q9H0R3 208 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 TRAV39A0A0B4J263 110 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 DPRXA6NFQ7 191 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 CBLN1P23435 193 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 HEPN1Q6WQI6 88 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 ERASQ7Z444 233 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 OR10S1Q8NGN2 331 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 RPRMQ9NS64 109 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 CLN8Q9UBY8 286 aa9.75□□□□□ -0.85
NPC1L1-201ENST00000289547 A0A1B0GTI1 187 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms