RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 CHMP1AQ9HD42 196 aaPredicted RBP7.21□□□□□ -1.26
HMGN1-201ENST00000288344 VCX3AQ9NNX9 186 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 SDHAF2Q9NX18 166 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 ANXA10Q9UJ72 324 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 RNF150Q9ULK6 438 aa7.21□□□□□ -1.26
HMGN1-201ENST00000288344 A0A075B6Q4 140 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 IGKV1D-13A0A0B4J2D9 117 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 TSPAN15O95858 294 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 IGLV2-23P01705 113 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 APOA1P02647 267 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 EIF4EP06730 217 aaKnown RBP7.2□□□□□ -1.26
HMGN1-201ENST00000288344 IGKV1-13P0DP09 117 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 PPIFP30405 207 aaKnown RBP7.2□□□□□ -1.26
HMGN1-201ENST00000288344 GPR12P47775 334 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-201ENST00000288344 ACTBP60709 375 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 GPR107Q5VW38 600 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 WFDC9Q8NEX5 89 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 OR5AU1Q8NGC0 362 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 NOL4LQ96MY1 436 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-201ENST00000288344 ST6GALNAC5Q9BVH7 336 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
HMGN1-201ENST00000288344 IGHV7-81A0A0B4J1V7 117 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 OR5H14A6NHG9 310 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 SRRM4A7MD48 611 aaKnown RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 LINC00473A8K010 186 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 FCN1O00602 326 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 CTXN2P0C2S0 81 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 OR8U9P0C7N5 309 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 VSIG10L2P0DP72 767 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 ELK1P19419 428 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 MC5RP33032 325 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 DUTP33316 252 aaKnown RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 VDAC2P45880 294 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 ARFRP1Q13795 201 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 SPCS2Q15005 226 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 C5orf64Q2M2E5 130 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 UBE2NLQ5JXB2 153 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 XP32Q5T750 250 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 DHRS11Q6UWP2 260 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 GLDNQ6ZMI3 551 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 NDUFA11Q86Y39 141 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 C11orf44Q8N8P7 122 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 DRAXINQ8NBI3 349 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 OR8U1Q8NH10 309 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 OR10J5Q8NHC4 309 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 MYOZ3Q8TDC0 251 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 GPX8Q8TED1 209 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 S100A16Q96FQ6 103 aaKnown RBP7.19□□□□□ -1.26
HMGN1-201ENST00000288344 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 OR2W1Q9Y3N9 320 aa7.19□□□□□ -1.26
HMGN1-201ENST00000288344 BET1O15155 118 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 HSPA12AO43301 675 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 TPPPO94811 219 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 HLA-DRB1P01911 266 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF182P17025 639 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-201ENST00000288344 RPL5P46777 297 aaKnown RBP7.18□□□□□ -1.26
HMGN1-201ENST00000288344 RORCP51449 518 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 TMBIM6P55061 237 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 TAS2R20P59543 309 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 RPL30P62888 115 aaKnown RBP7.18□□□□□ -1.26
HMGN1-201ENST00000288344 NDPQ00604 133 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 HES1Q14469 280 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 FAM131AQ6UXB0 335 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 STPG2Q8N412 459 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 SAMD12Q8N8I0 201 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 MINDY2Q8NBR6 621 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 DYNC2LI1Q8TCX1 351 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 GIMAP1Q8WWP7 306 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 ACOT12Q8WYK0 555 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 PHF21AQ96BD5 680 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 SOSTQ9BQB4 213 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 BCL7BQ9BQE9 202 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 RBM38Q9H0Z9 239 aaKnown RBP7.18□□□□□ -1.26
HMGN1-201ENST00000288344 CDIP1Q9H305 208 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 MMP27Q9H306 513 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 DIABLOQ9NR28 239 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 FBXO7Q9Y3I1 522 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 NUBP2Q9Y5Y2 271 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 CEPT1Q9Y6K0 416 aa7.18□□□□□ -1.26
HMGN1-201ENST00000288344 M0QZ24 198 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 RRHO14718 337 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 NBR2O15453 112 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 HPGDSO60760 199 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 RBBP9O75884 186 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 IGHG4P01861 327 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 OPN1MWP04001 364 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 OPN1MW2P0DN77 364 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 OPN1MW3P0DN78 364 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 NFYAP23511 347 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-201ENST00000288344 PSMB8P28062 276 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 TALDO1P37837 337 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 PSG5Q15238 335 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 MSMO1Q15800 293 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 TMEM177Q53S58 311 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 CENPVQ7Z7K6 275 aaPredicted RBP7.17□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF329Q86UD4 541 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms