RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1.01
SKA1-201ENST00000285116 Q6P435 159 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 GPHA2Q96T91 129 aa8.77□□□□□ -1.01
SKA1-201ENST00000285116 WDR61Q9GZS3 305 aaKnown RBP8.77□□□□□ -1.01
SKA1-201ENST00000285116 CENPEQ02224 2701 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 CD300LBA8K4G0 201 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 SP9P0CG40 484 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 TDGF1P13385 188 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 GDF1P27539 372 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 BRS3P32247 399 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 CYB561P49447 251 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 CLDN18P56856 261 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 RANP62826 216 aaKnown RBP8.76□□□□□ -1.01
SKA1-201ENST00000285116 FAM180AQ6UWF9 173 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 Q8IYB0 196 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 FAM58AQ8N1B3 248 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 PRR18Q8N4B5 295 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 LPAR2Q9HBW0 351 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 DLL3Q9NYJ7 618 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 PSENENQ9NZ42 101 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 MED13Q9UHV7 2174 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 J3QT63 122 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 SYNGR1O43759 233 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 TNFSF13O75888 250 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 PSG2P11465 335 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 UBE2NP61088 152 aaKnown RBP8.76□□□□□ -1.01
SKA1-201ENST00000285116 ARL16Q0P5N6 197 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 TESK1Q15569 626 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 PRSS8Q16651 343 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 ZNF497Q6ZNH5 498 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 HAPLN4Q86UW8 402 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 WFIKKN1Q96NZ8 548 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 FAM173AQ9BQD7 235 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 ZNF703Q9H7S9 590 aaPredicted RBP8.76□□□□□ -1.01
SKA1-201ENST00000285116 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 MBNL3Q9NUK0 354 aaKnown RBP8.76□□□□□ -1.01
SKA1-201ENST00000285116 IL36RNQ9UBH0 155 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 WIPI2Q9Y4P8 454 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 TRAPPC1Q9Y5R8 145 aa8.76□□□□□ -1.01
SKA1-201ENST00000285116 DOCK7Q96N67 2140 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 CACNA1AO00555 2505 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 C5orf49A4QMS7 147 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 PINLYPA6NC86 204 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 RNF212BA8MTL3 300 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 IGKV1-5P01602 117 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 P0C879 139 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 MPLP40238 635 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
SKA1-201ENST00000285116 DHRS13Q6UX07 377 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 TMEM14EPQ6UXP3 125 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 Q6ZRM9 215 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ZBTB34Q8NCN2 500 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ZPBPQ9BS86 351 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 PRRG4Q9BZD6 226 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ZNF552Q9H707 407 aaPredicted RBP8.75□□□□□ -1.01
SKA1-201ENST00000285116 PARD6AQ9NPB6 346 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 CACNA1BQ00975 2339 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 SPAARA0A1B0GVQ0 90 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ANKRD30BLA7E2S9 258 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 IFNL4K9M1U5 179 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 IL3RAP26951 378 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ERVK11-1P61568 191 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ZNF585BQ52M93 769 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 TMEM256Q8N2U0 113 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 RPP25LQ8N5L8 163 aaKnown RBP8.75□□□□□ -1.01
SKA1-201ENST00000285116 OR4F5Q8NH21 305 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 NEK7Q8TDX7 302 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 TAF15Q92804 592 aaKnown RBP eCLIP8.75□□□□□ -1.01
SKA1-201ENST00000285116 SDSLQ96GA7 329 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 DIRC2Q96SL1 478 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 TMEM9BQ9NQ34 198 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ERRFI1Q9UJM3 462 aaPredicted RBP8.75□□□□□ -1.01
SKA1-201ENST00000285116 PXMP4Q9Y6I8 212 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 SVEP1Q4LDE5 3571 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 ARHGAP21Q5T5U3 1957 aa8.75□□□□□ -1.01
SKA1-201ENST00000285116 LILRA1O75019 489 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TRAPPC6AO75865 159 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CD99P14209 185 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CD46P15529 392 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 WNT5AP41221 380 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 C12orf49Q9H741 205 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 GP6Q9HCN6 339 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TMEM106BQ9NUM4 274 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 B4GALT7Q9UBV7 327 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CACNG5Q9UF02 275 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 YPEL1O60688 119 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CER1O95813 267 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 IL6RP08887 468 aaPredicted RBP8.74□□□□□ -1.01
SKA1-201ENST00000285116 IAPPP10997 89 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TMEM183BQ1AE95 376 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 SLC23A3Q6PIS1 610 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.74□□□□□ -1.01
SKA1-201ENST00000285116 TCTEX1D1Q8N7M0 179 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms