RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 VSIG10L2P0DP72 767 aa17.58■□□□□ 0.4
PDLIM3-203ENST00000284771 BPIFB3P59826 476 aa17.58■□□□□ 0.4
PDLIM3-203ENST00000284771 SUPT4H1P63272 117 aaKnown RBP17.58■□□□□ 0.4
PDLIM3-203ENST00000284771 SLC25A42Q86VD7 318 aa17.58■□□□□ 0.4
PDLIM3-203ENST00000284771 DDB2Q92466 427 aa17.58■□□□□ 0.4
PDLIM3-203ENST00000284771 MECP2P51608 486 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 DHODHQ02127 395 aa17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 C9orf139Q6ZV77 190 aa17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 OR51H1Q8NH63 302 aa17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 CHPT1Q8WUD6 406 aa17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 HSD17B10Q99714 261 aaKnown RBP17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 CUBNO60494 3623 aa17.57■□□□□ 0.4
PDLIM3-203ENST00000284771 TMEM128Q5BJH2 165 aa17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 ZNF66Q6ZN08 573 aa17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 OR5AN1Q8NGI8 311 aa17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 CFHR4Q92496 578 aa17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 MS4A7Q9GZW8 240 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 NSD1Q96L73 2696 aaPredicted RBP17.56■□□□□ 0.4
PDLIM3-203ENST00000284771 IGHV3-72A0A0B4J1Y9 119 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 MDFIC2A0A1B0GVS7 189 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 CRYM-AS1A6NIL9 109 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 F2RP25116 425 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 RAB13P51153 203 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 FBLN7Q53RD9 439 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 KCTD9Q7L273 389 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 TP53RKQ96S44 253 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 MEGF9Q9H1U4 602 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 FN1P02751 2386 aaKnown RBP17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 OOSP1A8MZH6 123 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 INMT-MINDY4F8WBC2 141 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 H0YJW9 148 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 TIMM23O14925 209 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 PEX14O75381 377 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 PPP1R1AQ13522 171 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 HABP2Q14520 560 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 TRIM16LQ309B1 348 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 SP6Q3SY56 376 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 MOB3BQ86TA1 216 aa17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 ALX4Q9H161 411 aaPredicted RBP17.55■□□□□ 0.4
PDLIM3-203ENST00000284771 RAMP3O60896 148 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 OR4E1P0C645 316 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 CD24P25063 80 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 DEFB112Q30KQ8 113 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 OR2B11Q5JQS5 317 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 OR8H3Q8N146 312 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 TCTEX1D2Q8WW35 142 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 ZNF48Q96MX3 618 aaPredicted RBP17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 NAA60Q9H7X0 242 aa17.54■□□□□ 0.4
PDLIM3-203ENST00000284771 TEX13DA0A0J9YY54 714 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 C3orf85A0A1B0GTC6 90 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 TXNL1O43396 289 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 IGKV1-16P04430 117 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 THBS3P49746 956 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 TUSC1Q2TAM9 212 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 ZNF585BQ52M93 769 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 CCDC71LQ8N9Z2 235 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 GLYATL2Q8WU03 294 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 PRR13Q9NZ81 148 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 FAM96BQ9Y3D0 163 aa17.53■□□□□ 0.4
PDLIM3-203ENST00000284771 A0A0B4J293 547 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 INAFM1C9JVW0 142 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 OR5AC1P0C628 307 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 RAG2P55895 527 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 SGPP2Q8IWX5 399 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 TEX29Q8N6K0 151 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 OR52B4Q8NGK2 314 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 PIFOQ8TCI5 191 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 GALNT14Q96FL9 552 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 RITA1Q96K30 269 aa17.52■□□□□ 0.4
PDLIM3-203ENST00000284771 FAM90A9PA6NNJ1 464 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 FCGR3BO75015 233 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 FBP1P09467 338 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 S100GP29377 79 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 SRP14P37108 136 aaKnown RBP17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 DHRS2Q13268 280 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 CCDC144NLQ6NUI1 221 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 ADTRPQ96IZ2 230 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 SEC22CQ9BRL7 303 aa17.52■□□□□ 0.39
PDLIM3-203ENST00000284771 TEP1Q99973 2627 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 C9orf170A2RU37 121 aa17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 VGLL3A8MV65 326 aa17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 TAS2R31P59538 309 aa17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 CATR1Q13166 79 aa17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 SPAG16Q8N0X2 631 aa17.51■□□□□ 0.39
PDLIM3-203ENST00000284771 HNF1AP20823 631 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 VAMP1P23763 118 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 UBE2MP61081 183 aaKnown RBP17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 SLC9A3R2Q15599 337 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 C4orf46Q504U0 113 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 PRDM13Q9H4Q3 707 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 SLC35D1Q9NTN3 355 aa17.5■□□□□ 0.39
PDLIM3-203ENST00000284771 RNF212BA8MTL3 300 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 H0Y980 276 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 VENTXO95231 258 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 SFT2D2O95562 160 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 IGKV1-39P01597 117 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 HLA-AP01891 365 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 IGKV1D-39P04432 117 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 CD1BP29016 333 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 TMEM187Q14656 261 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms