RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZFP92A6NM28 416 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OPN1MWP04001 364 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CXCL1P09341 107 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OPN1MW2P0DN77 364 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OPN1MW3P0DN78 364 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CATR1Q13166 79 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 IZUMO4Q1ZYL8 232 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 MRPL37Q9BZE1 423 aaKnown RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OR2J1Q9GZK6 312 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 ZDHHC11Q9H8X9 412 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 GAR1Q9NY12 217 aaKnown RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 MIOXQ9UGB7 285 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 MAP1LC3B2A6NCE7 125 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OOEPA6NGQ2 149 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CDIPTO14735 213 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 LY86O95711 162 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 HAND1O96004 215 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 P0C879 139 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 S100A2P29034 98 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CD81P60033 236 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 SLC38A11Q08AI6 406 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 EIF4EBP1Q13541 118 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 C3AR1Q16581 482 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 SPANXN5Q5MJ07 72 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 DNLZQ5SXM8 178 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 SPATA46Q5T0L3 261 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 LCN15Q6UWW0 184 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 LURAP1LQ8IV03 231 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 FAM210BQ96KR6 192 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 GGACTQ9BVM4 153 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 BCL2L14Q9BZR8 327 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 MAP1LC3BQ9GZQ8 125 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 OR51B6Q9H340 312 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.83□□□□□ -0.68
C9orf3-201ENST00000277198 SH3BGRL2Q9UJC5 107 aa10.83□□□□□ -0.68
C9orf3-201ENST00000277198 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-201ENST00000277198 A1L4Q6 167 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 CYB5BO43169 146 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 IGHV2-70P01814 119 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 ZNF16P17020 682 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-201ENST00000277198 NCMAPQ5T1S8 102 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 GFRALQ6UXV0 394 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 TMEM178AQ8NBL3 297 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 FAM216AQ8WUB2 273 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 VSIRQ9H7M9 311 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 SLC39A9Q9NUM3 307 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 DMRT1Q9Y5R6 373 aa10.82□□□□□ -0.68
C9orf3-201ENST00000277198 TGIF2-C20orf24A0A0A6YYL0 155 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 TMEM250H0YL14 139 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 SOX15O60248 233 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-201ENST00000277198 WDR31Q8NA23 367 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 PSMG3-AS1Q96PY0 264 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 TMEM147Q9BVK8 224 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 NAT8Q9UHE5 227 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 URGCP-MRPS24S4R325 110 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 FREM1Q5H8C1 2179 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 TRAV39A0A0B4J263 110 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 LRRC30A6NM36 301 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 ZNF737O75373 536 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 CLDN1O95832 211 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 CRYABP02511 175 aaKnown RBP10.81□□□□□ -0.68
C9orf3-201ENST00000277198 NDUFA6P56556 154 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 NKX6-1P78426 367 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-201ENST00000277198 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-201ENST00000277198 CRYBG3Q68DQ2 2970 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 SLC25A40Q8TBP6 338 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 LHX4Q969G2 390 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 DEFB127Q9H1M4 99 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 RBKSQ9H477 322 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 SPRR3Q9UBC9 169 aa10.81□□□□□ -0.68
C9orf3-201ENST00000277198 CTXND1A0A1B0GTU2 59 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 IFNL4K9M1U5 179 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 RAB29O14966 203 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 YIF1AO95070 293 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 CLDN14O95500 239 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 IL2RGP31785 369 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 MEF2BQ02080 365 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-201ENST00000277198 PAX5Q02548 391 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 PSG7Q13046 419 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 ZNF66Q6ZN08 573 aa10.8□□□□□ -0.68
C9orf3-201ENST00000277198 RPP25LQ8N5L8 163 aaKnown RBP10.8□□□□□ -0.68
C9orf3-201ENST00000277198 NINJ1Q92982 152 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms