RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SRIP30626 198 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 WASP42768 502 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 OR1D5P58170 312 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 SFTPA1Q8IWL2 248 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 MTURNQ8N3F0 131 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 SPAG17Q6Q759 2223 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 hDV102S1A0JD36 115 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 LRP5LA4QPB2 252 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 PSMB11A5LHX3 300 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 NKX2-2O95096 273 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 CLDN1O95832 211 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 STAG3L2P0CL84 134 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 SLC25A6P12236 298 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 GPM6AP51674 278 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 INO80CQ6PI98 192 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-201ENST00000274071 WDR74Q6RFH5 385 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-201ENST00000274071 OR51E1Q8TCB6 317 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM204Q9BSN7 226 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 C19orf24Q9BVV8 132 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 PBOV1Q9GZY1 135 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 JPT1Q9UK76 154 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 UBE2J1Q9Y385 318 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-201ENST00000274071 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 DNAH14Q0VDD8 3507 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 C2orf16Q68DN1 1984 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 GPR75O95800 540 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 FTH1P19P0C7X4 201 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 UBE2G1P62253 170 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 MYBPHQ13203 477 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 FOXE3Q13461 319 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 GAB4Q2WGN9 574 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 NMSQ5H8A3 153 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 KIR3DL3Q8N743 410 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ULBP2Q9BZM5 246 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 HES4Q9HCC6 221 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR1A2Q9Y585 309 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 HS3ST3A1Q9Y663 406 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 LHFPL6Q9Y693 200 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 TRPM6Q9BX84 2022 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 TRBV9A0A0B4J1U6 114 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR4C46A6NHA9 309 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 NPIPA5E9PKD4 350 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 NPIPA3F8WFD2 350 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 DEGS1O15121 323 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ADH4P08319 380 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 CCL2P13500 99 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 CRYBB3P26998 211 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 HIST1H1AQ02539 215 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-201ENST00000274071 TNXAQ16473 311 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
PDGFC-201ENST00000274071 CCDC71LQ8N9Z2 235 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR10AG1Q8NH19 301 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR4C3Q8NH37 302 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OCC1Q8TAD7 63 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 STRADBQ9C0K7 418 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 S1PR5Q9H228 398 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 WDR54Q9H977 334 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 NPIPA1Q9UND3 350 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 SLC17A4Q9Y2C5 497 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 LRRK1Q38SD2 2015 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 CTXND1A0A1B0GTU2 59 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 A0A1B0GW15 77 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ANKRD30BLA7E2S9 258 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 LAMTOR5O43504 91 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 SPINK4O60575 86 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 SLC35E2P0CK97 266 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 IGFBP2P18065 325 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 GPR183P32249 361 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ACSM6Q6P461 480 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 APOBEC3DQ96AK3 386 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR2A5Q96R48 311 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 OR4C12Q96R67 309 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 GPHA2Q96T91 129 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 IGFLR1Q9H665 355 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF835Q9Y2P0 537 aa7.8□□□□□ -1.16
PDGFC-201ENST00000274071 IGKV1-9A0A0C4DH69 117 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 BMPR1BO00238 502 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 PNMTP11086 282 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 CYB561P49447 251 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 MLF2Q15773 248 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 PRICKLE4Q2TBC4 344 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 STPG3Q8N7X2 389 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 OR5A1Q8NGJ0 315 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 OR1F12Q8NHA8 337 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 NEU4Q8WWR8 484 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 MBD6Q96DN6 1003 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 COPS7AQ9UBW8 275 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 PTRH2Q9Y3E5 179 aaKnown RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 HEBP2Q9Y5Z4 205 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 A0A0G2JLM5 398 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.79□□□□□ -1.16
PDGFC-201ENST00000274071 H3BRM9 83 aa7.79□□□□□ -1.16
PDGFC-201ENST00000274071 SIVA1O15304 175 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms