RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 C7orf69Q9H7B7 122 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 PAIP2BQ9ULR5 123 aaKnown RBP20.13■□□□□ 0.81
SSBP4-201ENST00000270061 POLR3KQ9Y2Y1 108 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-201ENST00000270061 LINC00312Q9Y6C7 94 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 A8MXK9 166 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 ADAM20O43506 726 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 NDUFB3O43676 98 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 FAM53AQ6NSI3 398 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-201ENST00000270061 ZNF695Q8IW36 515 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 SLC35G3Q8N808 338 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 AGMATQ9BSE5 352 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 OR2D2Q9H210 308 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 TAS2R3Q9NYW6 316 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 TNFSF18Q9UNG2 199 aa20.13■□□□□ 0.81
SSBP4-201ENST00000270061 IGHV3-43A0A0B4J1X8 118 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 MEX3AA1L020 520 aaKnown RBP20.12■□□□□ 0.81
SSBP4-201ENST00000270061 IGHV3-43DP0DP04 118 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 LYL1P12980 280 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 NDUFB7P17568 137 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 EIF4EBP1Q13541 118 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-201ENST00000270061 LRRC10Q5BKY1 277 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 RBPMSQ93062 196 aaKnown RBP20.12■□□□□ 0.81
SSBP4-201ENST00000270061 RNF126Q9BV68 326 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 SSBP3Q9BWW4 388 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-201ENST00000270061 MMP26Q9NRE1 261 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 GNG12Q9UBI6 72 aa20.12■□□□□ 0.81
SSBP4-201ENST00000270061 LYPD2Q6UXB3 125 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 OR52M1Q8NGK5 317 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 NEIL1Q96FI4 390 aaPredicted RBP20.11■□□□□ 0.81
SSBP4-201ENST00000270061 MFFQ9GZY8 342 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 HEXA-AS1Q9H8Q6 139 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 LIN7CQ9NUP9 197 aaKnown RBP20.11■□□□□ 0.81
SSBP4-201ENST00000270061 GSKIPQ9P0R6 139 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 FCN3O75636 299 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 OR8B3Q8NGG8 313 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 OR8B2Q96RD0 313 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 GFOD1Q9NXC2 390 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 RNF150Q9ULK6 438 aa20.11■□□□□ 0.81
SSBP4-201ENST00000270061 TCF21O43680 179 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 PET100P0DJ07 73 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 S100A11P31949 105 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 GNB2P62879 340 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 ZNF345Q14585 488 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 OPCMLQ14982 345 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 PRSS54Q6PEW0 395 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 TMUB2Q71RG4 321 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 FGFRL1Q8N441 504 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 OR10A7Q8NGE5 316 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 OR51H1Q8NH63 302 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 NANPQ8TBE9 248 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 IDI2-AS1Q9NZ38 188 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 MBD2Q9UBB5 411 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 CTSZQ9UBR2 303 aa20.1■□□□□ 0.81
SSBP4-201ENST00000270061 VDAC1P21796 283 aa20.09■□□□□ 0.81
SSBP4-201ENST00000270061 RAB32Q13637 225 aa20.09■□□□□ 0.81
SSBP4-201ENST00000270061 C5orf30Q96GV9 206 aa20.09■□□□□ 0.81
SSBP4-201ENST00000270061 FAM212BQ9NTI7 297 aaPredicted RBP20.09■□□□□ 0.81
SSBP4-201ENST00000270061 GAB2Q9UQC2 676 aa20.09■□□□□ 0.81
SSBP4-201ENST00000270061 A0A0D9SG52 128 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 H0YIZ8 118 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 OR2F2O95006 317 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 SERPINE2P07093 398 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 RPL31P62899 125 aaKnown RBP20.08■□□□□ 0.81
SSBP4-201ENST00000270061 SRSF2Q01130 221 aaKnown RBP20.08■□□□□ 0.81
SSBP4-201ENST00000270061 OR2F1Q13607 317 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 LTC4SQ16873 150 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 ACOT7LQ6ZUV0 252 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 SPATA3Q8NHX4 192 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 PSG11Q9UQ72 335 aa20.08■□□□□ 0.81
SSBP4-201ENST00000270061 DVL1O14640 695 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF66Q6ZN08 573 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 TCTEX1D1Q8N7M0 179 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 SPIN2AQ99865 258 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 SPIN2BQ9BPZ2 258 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 C19orf12Q9NSK7 152 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 ZFP57Q9NU63 452 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 INSIG2Q9Y5U4 225 aa20.08■□□□□ 0.8
SSBP4-201ENST00000270061 TSC22D2O75157 780 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 EPHA1P21709 976 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 OMGP23515 440 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 RAB7AP51149 207 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 KRTAP24-1Q3LI83 254 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 NMSQ5H8A3 153 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 KCNRGQ8N5I3 272 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 GAL3ST2Q9H3Q3 398 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 SDHAF2Q9NX18 166 aa20.07■□□□□ 0.8
SSBP4-201ENST00000270061 ST8SIA5O15466 376 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 CATR1Q13166 79 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF585BQ52M93 769 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 HSD17B10Q99714 261 aaKnown RBP20.06■□□□□ 0.8
SSBP4-201ENST00000270061 ARL6Q9H0F7 186 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 AUP1Q9Y679 476 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 RNF222A6NCQ9 220 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 TMEM200BQ69YZ2 307 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF767PQ75MW2 155 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 INO80EQ8NBZ0 244 aaPredicted RBP20.06■□□□□ 0.8
SSBP4-201ENST00000270061 OR4D5Q8NGN0 318 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 ABHD14BQ96IU4 210 aa20.06■□□□□ 0.8
SSBP4-201ENST00000270061 RPUSD1Q9UJJ7 312 aaKnown RBP20.06■□□□□ 0.8
SSBP4-201ENST00000270061 ZNF134P52741 427 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms