RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MARCH11A6NNE9 402 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 B4DEV8 164 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 H3BP45 60 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 UBE2CO00762 179 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 IGKV1D-33P01593 117 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 IGKV1-33P01594 117 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 BCL2P10415 239 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 HEPN1Q6WQI6 88 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 ZNF429Q86V71 674 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 ELOVL5Q9NYP7 299 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 GTF3C1Q12789 2109 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 TNFRSF13BO14836 293 aaPredicted RBP9.23□□□□□ -0.93
MSH3-201ENST00000265081 SOX15O60248 233 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 IFNA4P05014 189 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 VDAC2P45880 294 aaPredicted RBP9.23□□□□□ -0.93
MSH3-201ENST00000265081 GAFA1Q96PS6 74 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 GCM1Q9NP62 436 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 H3BQ15 152 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 SOHLH1Q5JUK2 328 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 DTD1Q8TEA8 209 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 GGACTQ9BVM4 153 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 UFSP2Q9NUQ7 469 aa9.23□□□□□ -0.93
MSH3-201ENST00000265081 IGHV3-64DA0A0J9YX35 117 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 SEC14L6B5MCN3 397 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 IGHV1-46P01743 117 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 ZNF83P51522 516 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 NCR3LG1Q68D85 454 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 TCTEX1D2Q8WW35 142 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 RPS10P5Q9NQ39 176 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 A6NLC8 198 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 RAB2AP61019 212 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 DCTN5Q9BTE1 182 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 OR6C3Q9NZP0 311 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 MLXQ9UH92 298 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 M0R1B8 84 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 RAB5AP20339 215 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 RND2P52198 227 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 ACSM6Q6P461 480 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 ZNF788Q6ZQV5 615 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 RPP25LQ8N5L8 163 aaKnown RBP9.22□□□□□ -0.93
MSH3-201ENST00000265081 CYB561D1Q8N8Q1 229 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 Q8NA96 180 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 PPP1R35Q8TAP8 253 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 SCGB1C1Q8TD33 95 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 GFOD1Q9NXC2 390 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 DUSP13Q9UII6 198 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 LAMA5O15230 3695 aa9.22□□□□□ -0.93
MSH3-201ENST00000265081 INTS1Q8N201 2190 aaKnown RBP9.21□□□□□ -0.93
MSH3-201ENST00000265081 ZG16O60844 167 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 CRYAAP02489 173 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 OR13C7P0DN81 318 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 RELBQ01201 579 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 ZNF816Q0VGE8 651 aaPredicted RBP9.21□□□□□ -0.93
MSH3-201ENST00000265081 BTNL3Q6UXE8 466 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 OR10A7Q8NGE5 316 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 ZNF596Q8TC21 504 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 RAB1CQ92928 201 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 RAB39BQ96DA2 213 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 CALYQ9NYX4 217 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 KBTBD11-OT1A0A1B0GTJ5 212 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 CD40P25942 277 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 Q3ZCU0 254 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 RAB9BQ9NP90 201 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 CLN8Q9UBY8 286 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 PSG11Q9UQ72 335 aa9.21□□□□□ -0.93
MSH3-201ENST00000265081 RBM7Q9Y580 266 aaKnown RBP9.21□□□□□ -0.93
MSH3-201ENST00000265081 MBP02144 154 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 TAGLN2P37802 199 aaKnown RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 RAB7AP51149 207 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 SPANXN5Q5MJ07 72 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 ZNF808Q8N4W9 903 aaPredicted RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 RNASE11Q8TAA1 199 aaKnown RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 R3HDM4Q96D70 268 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 NPCDR1Q9BY65 106 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 DSCAMO60469 2012 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 TET2Q6N021 2002 aaPredicted RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 A0A1W2PPH5 198 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 KRASP01116 189 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 SPCS3P61009 180 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 PNRC1Q12796 327 aaPredicted RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 TMEM170AQ8WVE7 144 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 ITLN1Q8WWA0 313 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 TVP23CQ96ET8 276 aa9.21□□□□□ -0.94
MSH3-201ENST00000265081 QTRT1Q9BXR0 403 aaKnown RBP9.21□□□□□ -0.94
MSH3-201ENST00000265081 NCOR1O75376 2440 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 PHOX2AO14813 284 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 ZNF787Q6DD87 383 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 H2BFWTQ7Z2G1 175 aa9.2□□□□□ -0.94
MSH3-201ENST00000265081 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms