RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 MAGEA5P43359 124 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 GPR12P47775 334 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 GNG10P50151 68 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 VAMP3Q15836 100 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 TMEM256Q8N2U0 113 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 K7ESF4 209 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 C1QTNF9P0C862 333 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 CEACAM1P13688 526 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ATP5G3P48201 142 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ACY3Q96HD9 319 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ZNF716A6NP11 495 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 SH2D1BO14796 132 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 AGFG2O95081 481 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 FKBP2P26885 142 aaKnown RBP11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 SRD5A2P31213 254 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 RAB31Q13636 194 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ASPHD1Q5U4P2 390 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 Q6ZRM9 215 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 ZNF664Q8N3J9 261 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 WNT10AQ9GZT5 417 aa11.9□□□□□ -0.5
TUBGCP3-201ENST00000261965 SPG11Q96JI7 2443 aa11.9□□□□□ -0.51
TUBGCP3-201ENST00000261965 SPINT2O43291 252 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 IGLV3-1P01715 115 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 GCH1P30793 250 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 Q6ZN92 141 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 DUXBA0A1W2PPF3 345 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 WNT9BO14905 357 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 ZNF253O75346 499 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 IGHV2-5P01817 119 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 UCP3P55916 312 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 MIC13Q5XKP0 118 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 GGNQ86UU5 652 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 OR4P4Q8NGL7 312 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 PCP4P48539 62 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 Q0VFX4 171 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 ZNF506Q5JVG8 444 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
TUBGCP3-201ENST00000261965 NAPSAO96009 420 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 RNF122Q9H9V4 155 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 TAAR3PQ9P1P4 343 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 ZNF503-AS2A6NEH8 195 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 FOLR2P14207 255 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 HINT1P49773 126 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 PCED1AQ9H1Q7 454 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 RNF212BA8MTL3 300 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 DKK1O94907 266 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 S1PR2O95136 353 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 PLAUP00749 431 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 HNRNPA3P51991 378 aaKnown RBP11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 IL11RAQ14626 422 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 ABHD12Q8N2K0 398 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 TMEM105Q8N8V8 129 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
TUBGCP3-201ENST00000261965 IGKV1-6A0A0C4DH72 117 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 RAMP3O60896 148 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 APOA2P02652 100 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 TAS2R60P59551 318 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 VPS25Q9BRG1 176 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 HSBP1O75506 76 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 CSN3P07498 182 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 OR5G3P0C626 314 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 FGF5P12034 268 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 GNB2P62879 340 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 DCAF12Q5T6F0 453 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 FAM19A2Q8N3H0 131 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 ATP23Q9Y6H3 246 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 MED12LQ86YW9 2145 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 A0A1W2PRD5 423 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 A0A1W2PRF3 423 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 A0A1W2PRM7 423 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 HRASP01112 189 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 TPPP2P59282 170 aa11.87□□□□□ -0.51
TUBGCP3-201ENST00000261965 RNASEKQ6P5S7 137 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms