RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LINC00470Q9BZP3 86 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
CUX2-201ENST00000261726 ZNF430Q9H8G1 570 aaPredicted RBP12.33□□□□□ -0.44
CUX2-201ENST00000261726 RHOVQ96L33 236 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 TNFSF18Q9UNG2 199 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 C9JCJ5 164 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 GCSAMQ8N6F7 178 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 SCN3AQ9NY46 2000 aa12.33□□□□□ -0.44
CUX2-201ENST00000261726 DSPPQ9NZW4 1301 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 OR4D5Q8NGN0 318 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 S1PR2O95136 353 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 VSIG10L2P0DP72 767 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 MPV17P39210 176 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 ARF6P62330 175 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 OR10S1Q8NGN2 331 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 MARS2Q96GW9 593 aaKnown RBP12.32□□□□□ -0.44
CUX2-201ENST00000261726 RFLNBQ8N5W9 214 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 TGIF2-C20orf24A0A0A6YYL0 155 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-66A0A0C4DH42 116 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 A0A0J9YW62 118 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 H0Y980 276 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 RELQ04864 619 aaPredicted RBP12.32□□□□□ -0.44
CUX2-201ENST00000261726 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 TUBA4BQ9H853 241 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 IDI2-AS1Q9NZ38 188 aa12.32□□□□□ -0.44
CUX2-201ENST00000261726 FGF12P61328 243 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 SERF2P84101 59 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 KIAA1644Q3SXP7 199 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 C1QL1O75973 258 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 JOSD1Q15040 202 aaPredicted RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 ZNF506Q5JVG8 444 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 ERASQ7Z444 233 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 KCNK7Q9Y2U2 307 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 NPBWR2P48146 333 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 NANOS3P60323 173 aaKnown RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 VKORC1L1Q8N0U8 176 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 TBL2Q9Y4P3 447 aaKnown RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 PSME4Q14997 1843 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3OR16-13A0A075B7E8 117 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 IGHV3-74A0A0B4J1X5 117 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 PPIAL4CA0A0B4J2A2 164 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 LDLRAD4O15165 306 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 PPIAL4GP0DN37 164 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 HIST1H1AQ02539 215 aaPredicted RBP12.31□□□□□ -0.44
CUX2-201ENST00000261726 DCAF12L2Q5VW00 463 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 CENPVL1A0A0U1RR11 272 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 NKX2-8O15522 239 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 RAB9AP51151 201 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 UNC119Q13432 240 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
CUX2-201ENST00000261726 ATP5J2P56134 94 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 C12orf54Q6X4T0 127 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 REC114Q7Z4M0 266 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 ZNF418Q8TF45 676 aaPredicted RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 TMEM45BQ96B21 275 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 CCL19Q99731 98 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 WDR54Q9H977 334 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 A0A1W2PP11 408 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 SRIP30626 198 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 PCSK4Q6UW60 755 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 FAM214BQ7L5A3 538 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 TMEM160Q9NX00 188 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 FOXI3A8MTJ6 420 aaPredicted RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 PLA2G10O15496 165 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 IGKV1D-16P01601 117 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 OR1P1Q8NH06 330 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 PEBP1P30086 187 aaKnown RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 CXorf66Q5JRM2 361 aaPredicted RBP12.3□□□□□ -0.44
CUX2-201ENST00000261726 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 RARRES2Q99969 163 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 A0A1W2PPV9 198 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
CUX2-201ENST00000261726 BRWD1Q9NSI6 2320 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 RECKO95980 971 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 MT-ND6P03923 174 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 UCNP55089 124 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 ZNF345Q14585 488 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 BHLHA9Q7RTU4 235 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 ISG15P05161 165 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 CRYBB3P26998 211 aa12.29□□□□□ -0.44
CUX2-201ENST00000261726 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
CUX2-201ENST00000261726 SELENOTP62341 195 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms