RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 LMO1P25800 156 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 PKIAP61925 76 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 KRTAP27-1Q3LI81 207 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 DCAF10Q5QP82 559 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 PRAMEF5Q5TYX0 476 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 KCNIP4Q6PIL6 250 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 YPEL4Q96NS1 127 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 FOXJ2Q9P0K8 574 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 FCGR3BO75015 233 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 SSTR5P35346 364 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 CDC34P49427 236 aaPredicted RBP13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 ZNF295-AS1Q8N0V1 137 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 CTDSP1Q9GZU7 261 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 IL17BQ9UHF5 180 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 DUSP13Q9UII6 198 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
SNCAIP-202ENST00000261368 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 TGOLN2O43493 480 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 KBTBD11O94819 623 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 HBZP02008 142 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 MPLP40238 635 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 CD81P60033 236 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 RNPS1Q15287 305 aaKnown RBP13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 SSX2Q16385 188 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 GCSAMLQ5JQS6 135 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 UNQ6494/PRO21346Q6UXR6 183 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 LINC00596Q86U02 117 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 MBD3L1Q8WWY6 194 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 DCTN5Q9BTE1 182 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 FBXW9Q5XUX1 488 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 WDYHV1Q96HA8 205 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 P2RX4Q99571 388 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 TRAV1-1A0A0B4J248 108 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 C17orf112F2Z3M2 114 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 CD46P15529 392 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
SNCAIP-202ENST00000261368 PSPNO60542 156 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 COX5BP10606 129 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 VKORC1L1Q8N0U8 176 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 OR4A16Q8NH70 328 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 PKIBQ9C010 78 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 PRDM13Q9H4Q3 707 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 IGKV3D-15A0A087WSY6 115 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 NDUFB4O95168 129 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 CYP2G1PQ6ZSU1 146 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 Q8IYB0 196 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 SRD5A3Q9H8P0 318 aa13.63□□□□□ -0.23
SNCAIP-202ENST00000261368 TRGV5A0A0B4J1U4 118 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 MBP02144 154 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 MAS1LP35410 378 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 ACOT6Q3I5F7 207 aaPredicted RBP13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 Q6P435 159 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 SSMEM1Q8WWF3 244 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 ZNF497Q6ZNH5 498 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 LURAP1Q96LR2 239 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 TRIB1Q96RU8 372 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 KLF13Q9Y2Y9 288 aaPredicted RBP13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 LRRC30A6NM36 301 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 B4E171 279 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 IL18BPO95998 194 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 TSPAN7P41732 249 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 GPR12P47775 334 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 TMEM183AQ8IXX5 376 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 Q8NFD4 153 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 TMEM18Q96B42 140 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 TRAPPC1Q9Y5R8 145 aa13.62□□□□□ -0.23
SNCAIP-202ENST00000261368 MDFIC2A0A1B0GVS7 189 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 AMBPP02760 352 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 SRSF7Q16629 238 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 NRN1LQ496H8 165 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 DHRS13Q6UX07 377 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 HRASP01112 189 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 ZNF645Q8N7E2 425 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 POLEQ07864 2286 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 TRBV24-1A0A075B6N3 115 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 M0R1X1 148 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 SPINK4O60575 86 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 GCH1P30793 250 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 THBS3P49746 956 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 ERVK-16P61578 105 aa13.61□□□□□ -0.23
SNCAIP-202ENST00000261368 SP1P08047 785 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 GZMHP20718 246 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 HOXA6P31267 233 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 ATP5G3P48201 142 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 SPINT2O43291 252 aa13.6□□□□□ -0.23
SNCAIP-202ENST00000261368 PSG7Q13046 419 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms