RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 RHOVQ96L33 236 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 FGF12P61328 243 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.61□□□□□ -0.55
ALPK3-201ENST00000258888 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF441Q8N8Z8 693 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 IL19Q9UHD0 177 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 TSPAN13O95857 204 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
ALPK3-201ENST00000258888 PCGF1Q9BSM1 259 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 IGHV3-72A0A0B4J1Y9 119 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 OR2H2O95918 312 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 CITED1Q99966 193 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 CTSBP07858 339 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 ID4P47928 161 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 MIC13Q5XKP0 118 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 M0QZK8 103 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 GGCTO75223 188 aaKnown RBP11.61□□□□□ -0.55
ALPK3-201ENST00000258888 AGRNO00468 2067 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 H2BFSP57053 126 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 KRTCAP3Q53RY4 240 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 HSPB9Q9BQS6 159 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 CD82P27701 267 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 HCP5Q6MZN7 132 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 IGHV1-45A0A0A0MS14 117 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 GREM1O60565 184 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 TRGC2P03986 189 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 TSPAN7P41732 249 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 PSME4Q14997 1843 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 C5orf66Q9H5L9 145 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF714Q96N38 554 aa11.6□□□□□ -0.55
ALPK3-201ENST00000258888 HOXA4Q00056 320 aaPredicted RBP11.6□□□□□ -0.55
ALPK3-201ENST00000258888 IFITM10A6NMD0 228 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 CEACAM18A8MTB9 384 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 EAF1Q96JC9 268 aaPredicted RBP11.59□□□□□ -0.55
ALPK3-201ENST00000258888 SH3BGRL3Q9H299 93 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 CYB5R3P00387 301 aaPredicted RBP11.59□□□□□ -0.55
ALPK3-201ENST00000258888 CD200R1LQ6Q8B3 271 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
ALPK3-201ENST00000258888 C1orf100Q5SVJ3 147 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 OR11H4Q8NGC9 324 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 H0YL77 283 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 CTSSP25774 331 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 SLC25A47Q6Q0C1 308 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 RARRES2Q99969 163 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 EIF3GO75821 320 aaKnown RBP eCLIP11.59□□□□□ -0.55
ALPK3-201ENST00000258888 EMP1P54849 157 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 PIN1P1O15428 100 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 ADRA2AP08913 450 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 FAM206AQ9NX38 181 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 CLDN18P56856 261 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 TWIST1Q15672 202 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 OR52M1Q8NGK5 317 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 KCNMB2Q9Y691 235 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 MGST3O14880 152 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 NMUP48645 174 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 UCP2P55851 309 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 Q5BKY6 102 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 MS4A5Q9H3V2 200 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 HILPDAQ9Y5L2 63 aa11.59□□□□□ -0.55
ALPK3-201ENST00000258888 ISG15P05161 165 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 LINC00869P0C866 280 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 HKR1P10072 659 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 PLP1P60201 277 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 ZNF273Q14593 569 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 SPANXN1Q5VSR9 72 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 ITLN1Q8WWA0 313 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 CCL21O00585 134 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 KCNMB1Q16558 191 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 WDR25Q64LD2 544 aaPredicted RBP11.58□□□□□ -0.56
ALPK3-201ENST00000258888 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 PET117Q6UWS5 81 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
ALPK3-201ENST00000258888 C17orf51A8MQB3 221 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 FHITP49789 147 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
ALPK3-201ENST00000258888 TGIF2-C20orf24A0A0A6YYL0 155 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 M0R3E3 92 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 ZNF735P0CB33 412 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 ZNF645Q8N7E2 425 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 LOC101059948A0A1B0GTJ6 334 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 LAIR2Q6ISS4 152 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 MYOZ3Q8TDC0 251 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 NPDC1Q9NQX5 325 aaPredicted RBP11.58□□□□□ -0.56
ALPK3-201ENST00000258888 LCTP09848 1927 aa11.58□□□□□ -0.56
ALPK3-201ENST00000258888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
ALPK3-201ENST00000258888 FHL5Q5TD97 284 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 PMS2CLQ68D20 193 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
ALPK3-201ENST00000258888 IGKV1D-42A0A075B6H8 117 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 PPIAL4EA0A075B759 164 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 PPIAL4DF5H284 164 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 PPIAL4FP0DN26 164 aa11.57□□□□□ -0.56
ALPK3-201ENST00000258888 AREGP15514 252 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms