RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 AGFG2O95081 481 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 MBP02144 154 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 FGF7P21781 194 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 PSMB3P49720 205 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 TNFSF10P50591 281 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 ADIRFQ15847 76 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 FAM209BQ5JX69 171 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 WDR82Q6UXN9 313 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 CYP2G1PQ6ZSU1 146 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 OR10D4PQ8NGN7 298 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 IGKV3-15P01624 115 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 C4orf17Q53FE4 359 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 PRAMEF6Q5VXH4 476 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 NCR3LG1Q68D85 454 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 CIB3Q96Q77 187 aaPredicted RBP12.74□□□□□ -0.37
DDX56-201ENST00000258772 TRIB1Q96RU8 372 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 UFSP2Q9NUQ7 469 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
DDX56-201ENST00000258772 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
DDX56-201ENST00000258772 PTPRBP23467 1997 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 LINC00473A8K010 186 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 TMEM250H0YL14 139 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 KBTBD11O94819 623 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 PTBP3O95758 552 aaKnown RBP12.73□□□□□ -0.37
DDX56-201ENST00000258772 SSTR5P35346 364 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 LINC00205P59089 165 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 TLE1Q04724 770 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 FFAR4Q5NUL3 377 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 DEFB123Q8N688 67 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 OR13A1Q8NGR1 328 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 IGHV3-43A0A0B4J1X8 118 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 RBMXL2O75526 392 aaKnown RBP12.73□□□□□ -0.37
DDX56-201ENST00000258772 IGHV3-43DP0DP04 118 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 COX5AP20674 150 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 SOX8P57073 446 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 RPS16P62249 146 aaKnown RBP12.73□□□□□ -0.37
DDX56-201ENST00000258772 COL10A1Q03692 680 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 TFF3Q07654 80 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 C16orf54Q6UWD8 224 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 ZNF66Q6ZN08 573 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 C16orf82Q7Z2V1 217 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 CNEP1R1Q8N9A8 125 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 RFESDQ8TAC1 157 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
DDX56-201ENST00000258772 LOXL4Q96JB6 756 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 LURAP1Q96LR2 239 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 TAAR6Q96RI8 345 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 NPCDR1Q9BY65 106 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 ACTR3CQ9C0K3 210 aaPredicted RBP12.73□□□□□ -0.37
DDX56-201ENST00000258772 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
DDX56-201ENST00000258772 TRBV23-1A0A0A0MS06 115 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 ZNF891A8MT65 544 aaPredicted RBP12.72□□□□□ -0.37
DDX56-201ENST00000258772 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 WISP2O76076 250 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
DDX56-201ENST00000258772 RPL23P62829 140 aaKnown RBP12.72□□□□□ -0.37
DDX56-201ENST00000258772 GUSBP1Q15486 140 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 BSXQ3C1V8 233 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 GATAD1Q8WUU5 269 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 HCFC1P51610 2035 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 DEFB108AA8MXU0 73 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 TIMM8AO60220 97 aaPredicted RBP12.72□□□□□ -0.37
DDX56-201ENST00000258772 IGHG3P01860 377 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 HOXC12P31275 282 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 SPINK9Q5DT21 86 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 LURAP1LQ8IV03 231 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 OR10A7Q8NGE5 316 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 RAB24Q969Q5 203 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 HSD17B10Q99714 261 aaKnown RBP12.72□□□□□ -0.37
DDX56-201ENST00000258772 PARLQ9H300 379 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 MANBALQ9NQG1 85 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 FZR1Q9UM11 496 aa12.72□□□□□ -0.37
DDX56-201ENST00000258772 ST8SIA5O15466 376 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 KITLGP21583 273 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 MDKP21741 143 aaPredicted RBP12.71□□□□□ -0.37
DDX56-201ENST00000258772 KIR2DL2P43627 348 aaPredicted RBP12.71□□□□□ -0.37
DDX56-201ENST00000258772 FABP6P51161 128 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 GNB2P62879 340 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 Q3ZCU0 254 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 VWA1Q6PCB0 445 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 ZNF709Q8N972 641 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 ZNF383Q8NA42 475 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 OR4F5Q8NH21 305 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 OR4F4Q96R69 305 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 PSG11Q9UQ72 335 aa12.71□□□□□ -0.37
DDX56-201ENST00000258772 MARCH11A6NNE9 402 aa12.71□□□□□ -0.38
DDX56-201ENST00000258772 RD3LP0DJH9 198 aa12.71□□□□□ -0.38
DDX56-201ENST00000258772 SMIM21Q3B7S5 101 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms