RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 OR10G8Q8NGN5 311 aa17.31■□□□□ 0.36
RARA-201ENST00000254066 OR5B3Q8NH48 314 aa17.31■□□□□ 0.36
RARA-201ENST00000254066 RAB1CQ92928 201 aa17.31■□□□□ 0.36
RARA-201ENST00000254066 STARD4Q96DR4 205 aa17.31■□□□□ 0.36
RARA-201ENST00000254066 ZNF430Q9H8G1 570 aaPredicted RBP17.31■□□□□ 0.36
RARA-201ENST00000254066 MYPOPQ86VE0 399 aaPredicted RBP17.3■□□□□ 0.36
RARA-201ENST00000254066 CADM4Q8NFZ8 388 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 BET1LQ9NYM9 111 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 IL36BQ9NZH7 164 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 C17orf112F2Z3M2 114 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 IZUMO4Q1ZYL8 232 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 VWA1Q6PCB0 445 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 KMT5CQ86Y97 462 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 LYG1Q8N1E2 194 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 PSMF1Q92530 271 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 CLDN23Q96B33 292 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 ULBP2Q9BZM5 246 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 METTL7AQ9H8H3 244 aa17.3■□□□□ 0.36
RARA-201ENST00000254066 IGHV2-70DA0A0C4DH43 119 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 C22orf46C9J442 243 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 NPIPB11E5RHQ5 1161 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 ZNF253O75346 499 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 S100A7P31151 101 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 TIMP3P35625 211 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 PRAMEF20Q5VT98 475 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 LIN7CQ9NUP9 197 aaKnown RBP17.29■□□□□ 0.36
RARA-201ENST00000254066 RP1P56715 2156 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 A0A1B0GX78 115 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 IGHV4-34P06331 123 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 PRRX1P54821 245 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 RPL19P84098 196 aaKnown RBP17.29■□□□□ 0.36
RARA-201ENST00000254066 TLE1Q04724 770 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 VWC2Q2TAL6 325 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 OR10J3Q5JRS4 329 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 PIGCQ92535 297 aa17.29■□□□□ 0.36
RARA-201ENST00000254066 LOC105371242A0A075B767 164 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 IGHV2OR16-5A0A0B4J2B6 119 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 NPIPA3F8WFD2 350 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 NDUFB4O95168 129 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 CD38P28907 300 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 ARF6P62330 175 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 ZNF90Q03938 601 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 TCF15Q12870 199 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 PARM1Q6UWI2 310 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 PNKDQ8N490 385 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 TMEM105Q8N8V8 129 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 OR1L3Q8NH93 324 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 RBFOX2O43251 390 aaKnown RBP eCLIP17.28■□□□□ 0.364e-7■■□□□ 11.4
RARA-201ENST00000254066 CBLN1P23435 193 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 KRTDAPP60985 99 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 COX19Q49B96 90 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 APH1AQ96BI3 265 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 OR6C1Q96RD1 312 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 GNB1LQ9BYB4 327 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 SLC35D1Q9NTN3 355 aa17.28■□□□□ 0.36
RARA-201ENST00000254066 TRIP6Q15654 476 aaKnown RBP17.27■□□□□ 0.36
RARA-201ENST00000254066 LINC00596Q86U02 117 aa17.27■□□□□ 0.36
RARA-201ENST00000254066 FADS6Q8N9I5 356 aa17.27■□□□□ 0.36
RARA-201ENST00000254066 SMIM12Q96EX1 92 aa17.27■□□□□ 0.36
RARA-201ENST00000254066 NPCDR1Q9BY65 106 aa17.27■□□□□ 0.36
RARA-201ENST00000254066 AQP7O14520 342 aa17.27■□□□□ 0.35
RARA-201ENST00000254066 MT-ND6P03923 174 aa17.27■□□□□ 0.35
RARA-201ENST00000254066 TMPRSS7Q7RTY8 843 aa17.27■□□□□ 0.35
RARA-201ENST00000254066 OR1L6Q8NGR2 347 aa17.27■□□□□ 0.35
RARA-201ENST00000254066 ERRFI1Q9UJM3 462 aaPredicted RBP17.27■□□□□ 0.35
RARA-201ENST00000254066 MUC6Q6W4X9 2439 aa17.27■□□□□ 0.35
RARA-201ENST00000254066 CLDN1O95832 211 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 OR10P1Q8NGE3 313 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 SPSB4Q96A44 273 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 NRN1Q9NPD7 142 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 CLEC5AQ9NY25 188 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 LY96Q9Y6Y9 160 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 TRAV30A0A087WSZ9 112 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 IGHV3-20A0A0C4DH32 117 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.26■□□□□ 0.35
RARA-201ENST00000254066 ARL4DP49703 201 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 CCL7P80098 99 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 ZNF585BQ52M93 769 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 FBLN7Q53RD9 439 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 RDH5Q92781 318 aa17.26■□□□□ 0.35
RARA-201ENST00000254066 QTRT1Q9BXR0 403 aaKnown RBP17.26■□□□□ 0.35
RARA-201ENST00000254066 PMS2P5A8MQ11 134 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 FCN1O00602 326 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 BCL3P20749 454 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 LGALS4P56470 323 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 HLA-DRB5Q30154 266 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 C19orf35Q6ZS72 473 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 ZNF114Q8NC26 417 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 OR1K1Q8NGR3 316 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 KLHDC7BQ96G42 594 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 TBL2Q9Y4P3 447 aaKnown RBP17.25■□□□□ 0.35
RARA-201ENST00000254066 ZDBF2Q9HCK1 2354 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 RAC3P60763 192 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 HTD2P86397 168 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 PMP22Q01453 160 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 TMEM108Q6UXF1 575 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 BHLHA15Q7RTS1 189 aaPredicted RBP17.25■□□□□ 0.35
RARA-201ENST00000254066 ANKRD37Q7Z713 158 aa17.25■□□□□ 0.35
RARA-201ENST00000254066 C17orf82Q86X59 251 aaPredicted RBP17.25■□□□□ 0.35
RARA-201ENST00000254066 PPIAL4AQ9Y536 164 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms