RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 OR5H8P0DN80 308 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 PSMB8P28062 276 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 CX3CL1P78423 397 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 PLGLAQ15195 96 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 MRPL41Q8IXM3 137 aaKnown RBP17.95■□□□□ 0.46
LSM4-201ENST00000252816 FUNDC2Q9BWH2 189 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 SLC35D1Q9NTN3 355 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 METTL1Q9UBP6 276 aaKnown RBP17.95■□□□□ 0.46
LSM4-201ENST00000252816 DNAH3Q8TD57 4116 aa17.95■□□□□ 0.46
LSM4-201ENST00000252816 TGP01266 2768 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 PRB2P02812 416 aaPredicted RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 CTXN2P0C2S0 81 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 SMIM18P0DKX4 95 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 NFYAP23511 347 aaPredicted RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 SLC6A1P30531 599 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 RPS16P62249 146 aaKnown RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 ZNF660Q6AZW8 331 aaPredicted RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 CNIH2Q6PI25 160 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 CROCCP3Q8IVE0 287 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 FLYWCH2Q96CP2 140 aaKnown RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 DUX3Q96PT4 197 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 TSNAXQ99598 290 aaKnown RBP17.94■□□□□ 0.46
LSM4-201ENST00000252816 KLK15Q9H2R5 256 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 AUNIPQ9H7T9 357 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 TPSG1Q9NRR2 321 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 ANXA10Q9UJ72 324 aa17.94■□□□□ 0.46
LSM4-201ENST00000252816 TRAV41A0A0B4J266 112 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 J3QRK9 145 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 EGR2P11161 476 aaPredicted RBP17.93■□□□□ 0.46
LSM4-201ENST00000252816 PTHLHP12272 177 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 CDX1P47902 265 aaPredicted RBP17.93■□□□□ 0.46
LSM4-201ENST00000252816 NCS1P62166 190 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 C19orf54Q5BKX5 351 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 GVQW1Q8N7I0 195 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 OR13F1Q8NGS4 319 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 CLCC1Q96S66 551 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 P2RX4Q99571 388 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 DIABLOQ9NR28 239 aa17.93■□□□□ 0.46
LSM4-201ENST00000252816 SPDEFO95238 335 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 IGLV1-40P01703 118 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 IGLV2-23P01705 113 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 MYCNOSP40205 109 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 KIAA0141Q14154 515 aaPredicted RBP17.92■□□□□ 0.46
LSM4-201ENST00000252816 DEFB136Q30KP8 78 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 MINDY2Q8NBR6 621 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 MYOZ3Q8TDC0 251 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 RAX2Q96IS3 184 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 OR2W1Q9Y3N9 320 aa17.92■□□□□ 0.46
LSM4-201ENST00000252816 IGKV1D-13A0A0B4J2D9 117 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 SLC25A17O43808 307 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 HLA-DQB1P01920 261 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 IGKV1-13P0DP09 117 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 DUTP33316 252 aaKnown RBP17.91■□□□□ 0.46
LSM4-201ENST00000252816 CRIP2P52943 208 aaPredicted RBP17.91■□□□□ 0.46
LSM4-201ENST00000252816 ECSCRQ19T08 205 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 BVESQ8NE79 360 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 DDB2Q92466 427 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 SLC25A46Q96AG3 418 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 A3GALT2U3KPV4 340 aa17.91■□□□□ 0.46
LSM4-201ENST00000252816 LINC00473A8K010 186 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 CCL24O00175 119 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 XRCC3O43542 346 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 SOX15O60248 233 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 CA2P00918 260 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 LUMP51884 338 aaPredicted RBP17.9■□□□□ 0.46
LSM4-201ENST00000252816 VBP1P61758 197 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 FOXB2Q5VYV0 432 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 ZNF562Q6V9R5 426 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 HOGA1Q86XE5 327 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 BEST4Q8NFU0 473 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 RCC1LQ96I51 464 aaKnown RBP17.9■□□□□ 0.46
LSM4-201ENST00000252816 FAM103A1Q9BTL3 118 aaKnown RBP17.9■□□□□ 0.46
LSM4-201ENST00000252816 NUBP2Q9Y5Y2 271 aa17.9■□□□□ 0.46
LSM4-201ENST00000252816 SRRM4A7MD48 611 aaKnown RBP17.89■□□□□ 0.45
LSM4-201ENST00000252816 TUSC2O75896 110 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 IGLV2-14P01704 120 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 FCER2P06734 321 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 CRYGBP07316 175 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 TAGLNQ01995 201 aaKnown RBP17.89■□□□□ 0.45
LSM4-201ENST00000252816 TMEM177Q53S58 311 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 UBE2NLQ5JXB2 153 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 ZNF645Q8N7E2 425 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 SAMD12Q8N8I0 201 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 ABHD5Q8WTS1 349 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 S100A16Q96FQ6 103 aaKnown RBP17.89■□□□□ 0.45
LSM4-201ENST00000252816 ADTRPQ96IZ2 230 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 HARBI1Q96MB7 349 aa17.89■□□□□ 0.45
LSM4-201ENST00000252816 LGALS7P47929 136 aa17.88■□□□□ 0.45
LSM4-201ENST00000252816 SSBP2P81877 361 aaPredicted RBP17.88■□□□□ 0.45
LSM4-201ENST00000252816 RTL8BQ17RB0 113 aa17.88■□□□□ 0.45
LSM4-201ENST00000252816 PPP1R27Q86WC6 154 aa17.88■□□□□ 0.45
LSM4-201ENST00000252816 C4orf3Q8WVX3 66 aa17.88■□□□□ 0.45
LSM4-201ENST00000252816 NAA50Q9GZZ1 169 aaKnown RBP17.88■□□□□ 0.45
LSM4-201ENST00000252816 GNB4Q9HAV0 340 aa17.88■□□□□ 0.45
LSM4-201ENST00000252816 A0A1W2PN81 502 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 MEIS3P1A6NDR6 274 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 ARPC1BO15143 372 aaKnown RBP17.87■□□□□ 0.45
LSM4-201ENST00000252816 SHOXO15266 292 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 RRASP10301 218 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 CHRNA7P36544 502 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms