RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SPINK9Q5DT21 86 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 TMEM14EPQ6UXP3 125 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 LEAP2Q969E1 77 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 FAM234AQ9H0X4 552 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 DCAF16Q9NXF7 216 aa17.98■□□□□ 0.47
CLN6-201ENST00000249806 RAI1Q7Z5J4 1906 aaPredicted RBP17.97■□□□□ 0.47
CLN6-201ENST00000249806 A0A1B0GW64 132 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 YPEL1O60688 119 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 ZG16O60844 167 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 RBMXL2O75526 392 aaKnown RBP17.97■□□□□ 0.47
CLN6-201ENST00000249806 RPL39P5Q59GN2 51 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 TCTEX1D1Q8N7M0 179 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 YPEL2Q96QA6 119 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 AIFM2Q9BRQ8 373 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 RPRMQ9NS64 109 aa17.97■□□□□ 0.47
CLN6-201ENST00000249806 MARCH11A6NNE9 402 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 RAB29O14966 203 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 TLE4Q04727 773 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 HNF4GQ14541 408 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 LRRC75BQ2VPJ9 315 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 TMEM108Q6UXF1 575 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 FAM222BQ8WU58 562 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 SNRNP40Q96DI7 357 aaKnown RBP17.96■□□□□ 0.47
CLN6-201ENST00000249806 C14orf79Q96F83 325 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 CALYQ9NYX4 217 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 TLN1Q9Y490 2541 aaKnown RBP17.96■□□□□ 0.47
CLN6-201ENST00000249806 F2RL2O00254 374 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 FCGR3BO75015 233 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 RPS16P62249 146 aaKnown RBP17.96■□□□□ 0.47
CLN6-201ENST00000249806 SLC38A11Q08AI6 406 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 ZCCHC24Q8N2G6 241 aaKnown RBP17.96■□□□□ 0.47
CLN6-201ENST00000249806 CD300LFQ8TDQ1 290 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 RPS10P5Q9NQ39 176 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 NDRG3Q9UGV2 375 aa17.96■□□□□ 0.47
CLN6-201ENST00000249806 DPRXA6NFQ7 191 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 SLC31A2O15432 143 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 SNRNP70P08621 437 aaKnown RBP17.95■□□□□ 0.46
CLN6-201ENST00000249806 CGB3P0DN86 165 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 CGB7P0DN87 165 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 C17orf58Q2M2W7 97 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 AWAT1Q58HT5 328 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 C1orf229Q6ZS94 237 aaPredicted RBP17.95■□□□□ 0.46
CLN6-201ENST00000249806 ZNF561Q8N587 486 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 KIAA1456Q9P272 454 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 PTPRQQ9UMZ3 2332 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 A0A1W2PPE3 182 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 H7C2Y5 167 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 M0R1X1 148 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 CCL8P80075 99 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 NUP37Q8NFH4 326 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 DTD1Q8TEA8 209 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 R3HDM4Q96D70 268 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 WDR61Q9GZS3 305 aaKnown RBP17.95■□□□□ 0.46
CLN6-201ENST00000249806 OR6C3Q9NZP0 311 aa17.95■□□□□ 0.46
CLN6-201ENST00000249806 TANC2Q9HCD6 1990 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 UBE2L5PA0A1B0GUS4 154 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 BTBD17A6NE02 478 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 M0R036 132 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 PPIHO43447 177 aaKnown RBP17.94■□□□□ 0.46
CLN6-201ENST00000249806 GYPAP02724 150 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 THBDP07204 575 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 CCL13Q99616 98 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 IFI27L2Q9H2X8 130 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 ELOVL5Q9NYP7 299 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 LAMP3Q9UQV4 416 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 YLPM1P49750 1951 aaKnown RBP17.94■□□□□ 0.46
CLN6-201ENST00000249806 C7orf77A4D0Y5 90 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 FBP1P09467 338 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 STUMQ69YW2 141 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 DPPA3Q6W0C5 159 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 SSX9Q7RTT3 188 aa17.94■□□□□ 0.46
CLN6-201ENST00000249806 OR9G9P0C7N8 305 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 DAOP14920 347 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 TNFSF4P23510 183 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 PTAFRP25105 342 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 PLA2G5P39877 138 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 BSPH1Q075Z2 132 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 VKORC1L1Q8N0U8 176 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 SDSLQ96GA7 329 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 GAFA1Q96PS6 74 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 CLCC1Q96S66 551 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 RELNP78509 3460 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 PKDREJQ9NTG1 2253 aa17.93■□□□□ 0.46
CLN6-201ENST00000249806 K7ENP7 123 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 ATXN7O15265 892 aaPredicted RBP17.92■□□□□ 0.46
CLN6-201ENST00000249806 OR2B8PP59922 312 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 ADIPOQQ15848 244 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 ZNF726P1Q15940 193 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 SOHLH1Q5JUK2 328 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 SSX7Q7RTT5 188 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 FAM216BQ8N7L0 139 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 RXFP4Q8TDU9 374 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 TAF15Q92804 592 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLN6-201ENST00000249806 PSMG3Q9BT73 122 aaPredicted RBP17.92■□□□□ 0.46
CLN6-201ENST00000249806 QTRT1Q9BXR0 403 aaKnown RBP17.92■□□□□ 0.46
CLN6-201ENST00000249806 PMS2P5A8MQ11 134 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 OR4A8P0C604 315 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 CEBPGP53567 150 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 FAM122CQ6P4D5 195 aa17.92■□□□□ 0.46
CLN6-201ENST00000249806 CLDND2Q8NHS1 167 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms