RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 HPRT1P00492 218 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 CCL8P80075 99 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 DPPA3Q6W0C5 159 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 H2BFWTQ7Z2G1 175 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 PARD6GQ9BYG4 376 aaPredicted RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 MS4A7Q9GZW8 240 aaPredicted RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 HIPK2Q9H2X6 1198 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 TLN1Q9Y490 2541 aaKnown RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 SRSF3P84103 164 aaKnown RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 LTC4SQ16873 150 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 OR2B11Q5JQS5 317 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 TMEM182Q6ZP80 229 aaPredicted RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 CIB3Q96Q77 187 aaPredicted RBP18.94■□□□□ 0.62
HOXD9-201ENST00000249499 CCL13Q99616 98 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 SAP30LQ9HAJ7 183 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 PROP1O75360 226 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 GYPAP02724 150 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 OR8U8P0C7N1 319 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 IAPPP10997 89 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 SELLP14151 372 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 SNCAP37840 140 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 AKR1C1Q04828 323 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 ZNF616Q08AN1 781 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 AARDQ4LEZ3 155 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 ABHD14AQ9BUJ0 271 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 RBKSQ9H477 322 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 COQ3Q9NZJ6 369 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 PRELID3BQ9Y3B1 194 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 CACNA1DQ01668 2161 aa18.93■□□□□ 0.62
HOXD9-201ENST00000249499 F8W036 122 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 H3BP45 60 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 ADCYAP1P18509 176 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 CHRNB4P30926 498 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 EFNB3Q15768 340 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 NCR3LG1Q68D85 454 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 TMEM14EPQ6UXP3 125 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 DEFB108BQ8NET1 73 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 OR10A7Q8NGE5 316 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 C17orf50Q8WW18 174 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 NKX6-2Q9C056 277 aaPredicted RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 MS4A5Q9H3V2 200 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 IDI2-AS1Q9NZ38 188 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 hADV38S2A0JD32 116 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 MARCH11A6NNE9 402 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 SCAF4O95104 1147 aaKnown RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 MEF2CQ06413 473 aaPredicted RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 TMEM267Q0VDI3 215 aaPredicted RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 DMRTC2Q8IXT2 367 aaPredicted RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 RNASE6Q93091 150 aaKnown RBP18.92■□□□□ 0.62
HOXD9-201ENST00000249499 LINC00312Q9Y6C7 94 aa18.92■□□□□ 0.62
HOXD9-201ENST00000249499 A0A1B0GW64 132 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 MEX3AA1L020 520 aaKnown RBP18.91■□□□□ 0.62
HOXD9-201ENST00000249499 BTBD17A6NE02 478 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 ZNF134P52741 427 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 TCF23Q7RTU1 214 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 FAM216BQ8N7L0 139 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 R3HDM4Q96D70 268 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 NDRG3Q9UGV2 375 aa18.91■□□□□ 0.62
HOXD9-201ENST00000249499 PPIAL4EA0A075B759 164 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PPIAL4DF5H284 164 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 TMEM178BH3BS89 294 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 M0R1X1 148 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PPIAL4FP0DN26 164 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 ZNF525Q8N782 197 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PLPPR2Q96GM1 343 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 ADTRPQ96IZ2 230 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PPIAL4AQ9Y536 164 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PLCE1Q9P212 2302 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 E7EQL1 145 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PPIHO43447 177 aaKnown RBP18.9■□□□□ 0.62
HOXD9-201ENST00000249499 CD3EP07766 207 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 METTL15P1P0C7V9 234 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 APOBEC3AP31941 199 aaPredicted RBP18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PEA15Q15121 130 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 DUX4L9Q6RFH8 374 aaPredicted RBP18.9■□□□□ 0.62
HOXD9-201ENST00000249499 ZNF439Q8NDP4 499 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 FAM213BQ8TBF2 198 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 SCGB1C1Q8TD33 95 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PSMG3Q9BT73 122 aaPredicted RBP18.9■□□□□ 0.62
HOXD9-201ENST00000249499 PBDC1Q9BVG4 233 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 SMDT1Q9H4I9 107 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 FAM96BQ9Y3D0 163 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 KALRNO60229 2985 aa18.9■□□□□ 0.62
HOXD9-201ENST00000249499 B9A039 149 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 FHITP49789 147 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 TAGLNQ01995 201 aaKnown RBP18.89■□□□□ 0.61
HOXD9-201ENST00000249499 ATP6V1FQ16864 119 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 SPANXN5Q5MJ07 72 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 AKR1C8PQ5T2L2 129 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 ATRAIDQ6UW56 229 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 DDB2Q92466 427 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 S1PR3Q99500 378 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 TMEM231Q9H6L2 316 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 DSCAMO60469 2012 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 DYSFO75923 2080 aa18.89■□□□□ 0.61
HOXD9-201ENST00000249499 FAM157AC9JC47 383 aa18.88■□□□□ 0.61
HOXD9-201ENST00000249499 C1QL1O75973 258 aa18.88■□□□□ 0.61
HOXD9-201ENST00000249499 CT45A1Q5HYN5 189 aa18.88■□□□□ 0.61
HOXD9-201ENST00000249499 SLC25A24Q6NUK1 477 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms