RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 MED13Q9UHV7 2174 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 ZNF320A2RRD8 509 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 DEFB108AA8MXU0 73 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 HOXA6P31267 233 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 MCEMP1Q8IX19 187 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 PILRBQ9UKJ0 227 aa16.88■□□□□ 0.29
CACTIN-202ENST00000248420 IGKV3D-15A0A087WSY6 115 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 NDUFB4O95168 129 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 FOSL1P15407 271 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 IL3RAP26951 378 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 AESQ08117 197 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 LINC00696Q6ZRV3 163 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 TGIF2LYQ8IUE0 185 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 DTD1Q8TEA8 209 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 HSPB7Q9UBY9 170 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 MPC1Q9Y5U8 109 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 OR5B21A6NL26 309 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 LRRC30A6NM36 301 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 WNT9BO14905 357 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 SYNGR4O95473 234 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 COA6Q5JTJ3 125 aaKnown RBP16.87■□□□□ 0.29
CACTIN-202ENST00000248420 CENPVQ7Z7K6 275 aaPredicted RBP16.87■□□□□ 0.29
CACTIN-202ENST00000248420 LINC00596Q86U02 117 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 RFESDQ8TAC1 157 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 TMEM18Q96B42 140 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 OR2J1Q9GZK6 312 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 PATZ1Q9HBE1 687 aaKnown RBP16.87■□□□□ 0.29
CACTIN-202ENST00000248420 DCHS1Q96JQ0 3298 aa16.87■□□□□ 0.29
CACTIN-202ENST00000248420 LRP5LA4QPB2 252 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 PMS2P5A8MQ11 134 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 PDGFBP01127 241 aaPredicted RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 EDDM3BP56851 147 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 LTC4SQ16873 150 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 NRN1LQ496H8 165 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 ACSF3Q4G176 576 aaPredicted RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 ZNF826PQ6ZT77 177 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 MDP1Q86V88 176 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 ZNF709Q8N972 641 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 OR2M7Q8NG81 312 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 NEIL1Q96FI4 390 aaPredicted RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 NOL4LQ96MY1 436 aaPredicted RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 TMEM147Q9BVK8 224 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 SIT1Q9Y3P8 196 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 GRIFINA4D1Z8 144 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 J3QT63 122 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 NEURL1O76050 574 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 GCGP01275 180 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 COX5AP20674 150 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 GCH1P30793 250 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 CNN1P51911 297 aaKnown RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 GNB1P62873 340 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 LINC00470Q9BZP3 86 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 STRADBQ9C0K7 418 aa16.86■□□□□ 0.29
CACTIN-202ENST00000248420 ZNF703Q9H7S9 590 aaPredicted RBP16.86■□□□□ 0.29
CACTIN-202ENST00000248420 NTN3O00634 580 aaPredicted RBP16.85■□□□□ 0.29
CACTIN-202ENST00000248420 CT55Q8WUE5 264 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 ACY3Q96HD9 319 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 BOKQ9UMX3 212 aaPredicted RBP16.85■□□□□ 0.29
CACTIN-202ENST00000248420 GPR179Q6PRD1 2367 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 NPIPB11E5RHQ5 1161 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 ARR3P36575 388 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 TMEM105Q8N8V8 129 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 TP53TG5Q9Y2B4 290 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 TRAPPC1Q9Y5R8 145 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 NCOR1O75376 2440 aa16.85■□□□□ 0.29
CACTIN-202ENST00000248420 GGCTO75223 188 aaKnown RBP16.84■□□□□ 0.29
CACTIN-202ENST00000248420 PDLIM4P50479 330 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 LINC01551Q86U37 167 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 MRGPRDQ8TDS7 321 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 C12orf77C9JDV5 145 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 IGHV3-13P01766 116 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 IGHV3-7P01780 117 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 ANAPC16Q96DE5 110 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.84■□□□□ 0.29
CACTIN-202ENST00000248420 TIMM9Q9Y5J7 89 aa16.84■□□□□ 0.29
CACTIN-202ENST00000248420 TNRC6BQ9UPQ9 1833 aaKnown RBP16.84■□□□□ 0.29
CACTIN-202ENST00000248420 COX5BP10606 129 aa16.83■□□□□ 0.29
CACTIN-202ENST00000248420 CDC34P49427 236 aaPredicted RBP16.83■□□□□ 0.29
CACTIN-202ENST00000248420 RBFOX2O43251 390 aaKnown RBP eCLIP16.83■□□□□ 0.28
CACTIN-202ENST00000248420 THBS3P49746 956 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 NUTF2P61970 127 aaKnown RBP16.83■□□□□ 0.28
CACTIN-202ENST00000248420 GBGT1Q8N5D6 347 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 ZNF645Q8N7E2 425 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 PKIBQ9C010 78 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 FAM234AQ9H0X4 552 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 MANBALQ9NQG1 85 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 FKBP11Q9NYL4 201 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 LINC00473A8K010 186 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 PMS2CLQ68D20 193 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 IMMP2LQ96T52 175 aa16.83■□□□□ 0.28
CACTIN-202ENST00000248420 PARD6GQ9BYG4 376 aaPredicted RBP16.83■□□□□ 0.28
CACTIN-202ENST00000248420 MRPL37Q9BZE1 423 aaKnown RBP16.83■□□□□ 0.28
CACTIN-202ENST00000248420 MBNL3Q9NUK0 354 aaKnown RBP16.83■□□□□ 0.28
CACTIN-202ENST00000248420 SERPINA7P05543 415 aa16.82■□□□□ 0.28
CACTIN-202ENST00000248420 SSTR5P35346 364 aa16.82■□□□□ 0.28
CACTIN-202ENST00000248420 SPCS3P61009 180 aa16.82■□□□□ 0.28
CACTIN-202ENST00000248420 MSMO1Q15800 293 aa16.82■□□□□ 0.28
CACTIN-202ENST00000248420 LPAL2Q16609 132 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms