RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CCL20P78556 96 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 PTX4Q96A99 478 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 PPIAL4AQ9Y536 164 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 M0R3E3 92 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 GALP22466 123 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 STXBP6Q8NFX7 210 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 POLQO75417 2590 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 KBTBD11O94819 623 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
RIF1-201ENST00000243326 GPR132Q9UNW8 380 aa6.49□□□□□ -1.37
RIF1-201ENST00000243326 IGKV3-20P01619 116 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 SEC11BP0C7V7 166 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 EFNB1P98172 346 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CT55Q8WUE5 264 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 HIST1H4GQ99525 98 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 DNAJC4Q9NNZ3 241 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 BTCP35070 178 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CCR5P51681 352 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 UNC119Q13432 240 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 POC1AQ8NBT0 407 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 KLF13Q9Y2Y9 288 aaPredicted RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 ISLRO14498 428 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 IL9P15248 144 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 GPBAR1Q8TDU6 330 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 TIMP4Q99727 224 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 DCTN5Q9BTE1 182 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 ARHGAP21Q5T5U3 1957 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 A6NDN8 102 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CORTO00230 105 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 HBZP02008 142 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 BHLHA15Q7RTS1 189 aaPredicted RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 DEFB124Q8NES8 71 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 TOX2Q96NM4 488 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CRISPLD2Q9H0B8 497 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 PLXNB2O15031 1838 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 GNG7O60262 68 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 TYMSP04818 313 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 EMP1P54849 157 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 FXYD7P58549 80 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CCL13Q99616 98 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 HIST1H1EP10412 219 aaKnown RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 HOXA6P31267 233 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 ECSCRQ19T08 205 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 MAJINQ3KP22 176 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 FAM169BQ8N8A8 192 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CLDN14O95500 239 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 NGBQ9NPG2 151 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 AHDC1Q5TGY3 1603 aaPredicted RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 TMEM229AB2RXF0 380 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 GATA2P23769 480 aaPredicted RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 RAB24Q969Q5 203 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 KCNMB2Q9Y691 235 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 J3QR06 171 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 EPHA8P29322 1005 aaPredicted RBP6.48□□□□□ -1.37
RIF1-201ENST00000243326 GNG5P63218 68 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 CALHM1Q8IU99 346 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 IGKV1D-43A0A0B4J1Z2 117 aa6.48□□□□□ -1.37
RIF1-201ENST00000243326 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 SRSF12Q8WXF0 261 aaKnown RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 IL2RAP01589 272 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 RBPJQ06330 500 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 OIT3Q8WWZ8 545 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 PRRC2AP48634 2157 aaKnown RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 RASL10BQ96S79 203 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 HIVEP2P31629 2446 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 SLC25A17O43808 307 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 MOSP00540 346 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 FABP2P12104 132 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 CLDN18P56856 261 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 OR8B2Q96RD0 313 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 CD33P20138 364 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 PNRC1Q12796 327 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 HERPUD1Q15011 391 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 FAM201AQ5SY85 155 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 PKD1L2Q7Z442 2459 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 ZNF716A6NP11 495 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 PDE6DO43924 150 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 SUMO3P55854 103 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 ZNF345Q14585 488 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 OR6X1Q8NH79 312 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 NPDC1Q9NQX5 325 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 GLIPR1P48060 266 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 AQP3Q92482 292 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 ZNF324O75467 553 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 CXorf1O96002 111 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 MYOZ3Q8TDC0 251 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 ZNF721Q8TF20 911 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 GUCD1Q96NT3 240 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 FAHD2BQ6P2I3 314 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 RABAC1Q9UI14 185 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 NCOA6Q14686 2063 aaPredicted RBP6.47□□□□□ -1.37
RIF1-201ENST00000243326 PRR32B1ATL7 298 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 MS4A18H0YCH9 400 aa6.47□□□□□ -1.37
RIF1-201ENST00000243326 MS4A18Q3C1V0 323 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms