RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ZNF488Q96MN9 340 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 PSMG3Q9BT73 122 aaPredicted RBP6.56□□□□□ -1.36
CXCR4-201ENST00000241393 TM2D2Q9BX73 214 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 PARP12Q9H0J9 701 aaKnown RBP6.56□□□□□ -1.36
CXCR4-201ENST00000241393 MAGT1Q9H0U3 335 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 DEFB127Q9H1M4 99 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 HES4Q9HCC6 221 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 RPS10P5Q9NQ39 176 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 MMP24Q9Y5R2 645 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 C1orf196B1AJZ1 125 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 CST7O76096 145 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 PSG2P11465 335 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 CBR1P16152 277 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 IGHV1-2P23083 117 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 TNFSF10P50591 281 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF154Q13106 437 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF506Q5JVG8 444 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 WDR86Q86TI4 376 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 C17orf78Q8N4C9 275 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 TCTEX1D1Q8N7M0 179 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 FAM216AQ8WUB2 273 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 CLCC1Q96S66 551 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 CTDSP1Q9GZU7 261 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 TRAPPC2LQ9UL33 140 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 FBXO7Q9Y3I1 522 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 MED13Q9UHV7 2174 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 MYO15AQ9UKN7 3530 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 A0A087WWC5 75 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 A0A0G2JRQ6 117 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 A0A1W2PR80 420 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM30CPA0ZSE6 113 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 ARGFXA6NJG6 315 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 M0R036 132 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 TNFSF12O43508 249 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 SYNGR2O43760 224 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 NXPH2O95156 264 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 IGKV1-39P01597 117 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 IGKV1D-39P04432 117 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 SNRNP70P08621 437 aaKnown RBP6.55□□□□□ -1.36
CXCR4-201ENST00000241393 COX5AP20674 150 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 AGAP20933 346 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 OMGP23515 440 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 HBG1P69891 147 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 HBG2P69892 147 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 SERF2P84101 59 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 PAX5Q02548 391 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 KHDC3LQ587J8 217 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 SLC35E4Q6ICL7 350 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 IGFL2Q6UWQ7 119 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 C5orf24Q7Z6I8 188 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 IQCF2Q8IXL9 164 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 OR51H1Q8NH63 302 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 RNASE11Q8TAA1 199 aaKnown RBP6.55□□□□□ -1.36
CXCR4-201ENST00000241393 FAM110DQ8TAY7 271 aaPredicted RBP6.55□□□□□ -1.36
CXCR4-201ENST00000241393 SLC25A40Q8TBP6 338 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 OR2J1Q9GZK6 312 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 KCNIP1Q9NZI2 227 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
CXCR4-201ENST00000241393 BDP1A6H8Y1 2624 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 IFNL4K9M1U5 179 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SIRPB1O00241 398 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 PPIHO43447 177 aaKnown RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 NDUFS6O75380 124 aaKnown RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 HAND1O96004 215 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 IGKV1-5P01602 117 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 IGKV3-15P01624 115 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SRP19P09132 144 aaKnown RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 ASCL1P50553 236 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 IDH3GP51553 393 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 PSG7Q13046 419 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF585BQ52M93 769 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SPATA46Q5T0L3 261 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 PRIMA1Q86XR5 153 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF645Q8N7E2 425 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SCGB1C1Q8TD33 95 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 CD300LFQ8TDQ1 290 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SFT2D1Q8WV19 159 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 CXXC4Q9H2H0 198 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 OR51B6Q9H340 312 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 SEBOXQ9HB31 216 aaPredicted RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 CACNG5Q9UF02 275 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 RBM7Q9Y580 266 aaKnown RBP6.54□□□□□ -1.36
CXCR4-201ENST00000241393 GPR179Q6PRD1 2367 aa6.54□□□□□ -1.36
CXCR4-201ENST00000241393 A0A1B0GWJ7 208 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 CXorf65A6NEN9 183 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 OOEPA6NGQ2 149 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF98A6NK75 572 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 CDRT15L2A8MXV6 281 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 CDIPTO14735 213 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 ZNHIT1O43257 154 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 S100A8P05109 93 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 NHLRC4P0CG21 123 aaPredicted RBP6.53□□□□□ -1.36
CXCR4-201ENST00000241393 RAB5AP20339 215 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 KITLGP21583 273 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 S100A12P80511 92 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 MZT1Q08AG7 82 aa6.53□□□□□ -1.36
CXCR4-201ENST00000241393 CATR1Q13166 79 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms