RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 GFRA3O60609 400 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 MAS1LP35410 378 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 AKIRIN2Q53H80 203 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 NCR3LG1Q68D85 454 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 DTD1Q8TEA8 209 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 C20orf24Q9BUV8 137 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 BIN3Q9NQY0 253 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 CISD1Q9NZ45 108 aaKnown RBP13.43□□□□□ -0.26
UBE3D-201ENST00000237186 IL19Q9UHD0 177 aa13.43□□□□□ -0.26
UBE3D-201ENST00000237186 MARCH11A6NNE9 402 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SPRY3O43610 288 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 HPRT1P00492 218 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 GPR12P47775 334 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SELENOVP59797 346 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 ITLN1Q8WWA0 313 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 TMEM147Q9BVK8 224 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SCNM1Q9BWG6 230 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 RAB9BQ9NP90 201 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 GNG12Q9UBI6 72 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SPTBN2O15020 2390 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 H3BQ15 152 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 LINC00205P59089 165 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 GNB2P62879 340 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 FAM27E3Q08E93 113 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 OR8G2PQ6IF36 304 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 FAM180AQ6UWF9 173 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 ZNF561Q8N587 486 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 ZNRF1Q8ND25 227 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 NUP37Q8NFH4 326 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 RCC1LQ96I51 464 aaKnown RBP13.42□□□□□ -0.26
UBE3D-201ENST00000237186 RNF7Q9UBF6 113 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 CLN8Q9UBY8 286 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
UBE3D-201ENST00000237186 PUS1Q9Y606 427 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBE3D-201ENST00000237186 IGHV3OR15-7A0A075B7D8 119 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 A0A087WWC5 75 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 MKRN2OSH3BPM6 223 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 ZG16O60844 167 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 PTAFRP25105 342 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 CD40P25942 277 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 HOXA1P49639 335 aaPredicted RBP13.41□□□□□ -0.26
UBE3D-201ENST00000237186 RAB5BP61020 215 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
UBE3D-201ENST00000237186 C22orf34Q6ZV56 151 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 Q8TCH9 128 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 R3HDM4Q96D70 268 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 SAV1Q9H4B6 383 aaPredicted RBP13.41□□□□□ -0.26
UBE3D-201ENST00000237186 GCM1Q9NP62 436 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
UBE3D-201ENST00000237186 BCL2P10415 239 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 DAOP14920 347 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 MDKP21741 143 aaPredicted RBP13.4□□□□□ -0.26
UBE3D-201ENST00000237186 PDLIM3Q53GG5 364 aaPredicted RBP13.4□□□□□ -0.26
UBE3D-201ENST00000237186 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 VHLLQ6RSH7 139 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 SLC35E3Q7Z769 313 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 ZNF429Q86V71 674 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 OR10P1Q8NGE3 313 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 OR52E5Q8NH55 327 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 MALSU1Q96EH3 234 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 YPEL4Q96NS1 127 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 P2RX4Q99571 388 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 IFI27L2Q9H2X8 130 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 CALYQ9NYX4 217 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 UBE2L5PA0A1B0GUS4 154 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 CD55P08174 381 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 AGAP20933 346 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 ZNF134P52741 427 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 C17orf58Q2M2W7 97 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 STUMQ69YW2 141 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 MRGPRGQ86SM5 289 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 ISOC2Q96AB3 205 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 TVP23CQ96ET8 276 aa13.4□□□□□ -0.26
UBE3D-201ENST00000237186 IGHV1-46P01743 117 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 MBP02144 154 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 KIR2DS2P43631 304 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 RAB7AP51149 207 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 TNFAIP6P98066 277 aaPredicted RBP13.39□□□□□ -0.27
UBE3D-201ENST00000237186 LTC4SQ16873 150 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 LCN15Q6UWW0 184 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 SSX7Q7RTT5 188 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 DOLPP1Q86YN1 238 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 LINC00518Q8N0U6 118 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
UBE3D-201ENST00000237186 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 RAB39BQ96DA2 213 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 NIPSNAP3BQ9BS92 247 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 FAM234AQ9H0X4 552 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 LINC00574Q9H8X3 128 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 GFOD1Q9NXC2 390 aa13.39□□□□□ -0.27
UBE3D-201ENST00000237186 ELOVL5Q9NYP7 299 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms