RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RSPO3Q9BXY4 272 aaPredicted RBP11.06□□□□□ -0.64
VAMP4-201ENST00000236192 RPL31P62899 125 aaKnown RBP11.06□□□□□ -0.64
VAMP4-201ENST00000236192 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 MUC15Q8N387 334 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 TIMP4Q99727 224 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 TMEM56-RWDD3S4R434 201 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 K7EP34 96 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 DHHO43323 396 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 SP1P08047 785 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 TEPPQ6URK8 271 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 DNASE2BQ8WZ79 361 aa11.06□□□□□ -0.64
VAMP4-201ENST00000236192 A0A087X0K7 114 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 SUMO3P55854 103 aaPredicted RBP11.05□□□□□ -0.64
VAMP4-201ENST00000236192 MORN2Q502X0 79 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 Q6ZVH6 145 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 Q96M66 194 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 S1PR3Q99500 378 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 MRPL13Q9BYD1 178 aaKnown RBP11.05□□□□□ -0.64
VAMP4-201ENST00000236192 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 SCO2A0A1W2PP80 73 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 C1orf61Q13536 156 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 FAM53BQ14153 422 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 HOXB2P14652 356 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 CFPP27918 469 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 TIMP3P35625 211 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 ANKRD36A6QL64 1941 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 H3BRM9 83 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 ZNF818PQ6ZRF7 136 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 OR1F12Q8NHA8 337 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
VAMP4-201ENST00000236192 NPCDR1Q9BY65 106 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
VAMP4-201ENST00000236192 A0A1W2PNR3 127 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 IL18BPO95998 194 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 EMP1P54849 157 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 HBBP68871 147 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 OR9G4Q8NGQ1 327 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 OR1L4Q8NGR5 311 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 RTL8AQ9BWD3 113 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 TM2D1Q9BX74 207 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
VAMP4-201ENST00000236192 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 NEUROG1Q92886 237 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 KLF7O75840 302 aaPredicted RBP11.04□□□□□ -0.64
VAMP4-201ENST00000236192 TIAF1O95411 115 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 TMEM116Q8NCL8 245 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 NAA38Q9BRA0 125 aaKnown RBP11.04□□□□□ -0.64
VAMP4-201ENST00000236192 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 CRYBB3P26998 211 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 COL8A1P27658 744 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 SLAQ13239 276 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 TBC1D29Q9UFV1 150 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 ARID2Q68CP9 1835 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 KIAA1217Q5T5P2 1943 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 A0A1W2PS18 150 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 RBM11P57052 281 aaKnown RBP11.04□□□□□ -0.64
VAMP4-201ENST00000236192 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 GP6Q9HCN6 339 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
VAMP4-201ENST00000236192 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 ALG1L2C9J202 215 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 FOXF1Q12946 379 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 PLGLAQ15195 96 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
VAMP4-201ENST00000236192 NRTNQ99748 197 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 CHRNA10Q9GZZ6 450 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 LOC285556D6RIA3 1793 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 A0A0U1RQV5 110 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 TSPAN2O60636 221 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GCHFRP30047 84 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 PLSCR4Q9NRQ2 329 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 CCL26Q9Y258 94 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 SELENOKQ9Y6D0 94 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 UCP1P25874 307 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
VAMP4-201ENST00000236192 ID3Q02535 119 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GAGE2BQ13066 116 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GAGE2EQ4V326 116 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 POM121L2Q96KW2 1035 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 OBP2BQ9NPH6 170 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 CRIM1Q9NZV1 1036 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GAGE2DQ9UEU5 116 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 ZFAND5O76080 213 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 DXOO77932 396 aaKnown RBP11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GFRA1P56159 465 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 TM4SF20Q53R12 229 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 OCC1Q8TAD7 63 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 GATAD1Q8WUU5 269 aa11.03□□□□□ -0.64
VAMP4-201ENST00000236192 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms