RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 FAM212BQ9NTI7 297 aaPredicted RBP18.65■□□□□ 0.58
CDX1-201ENST00000231656 CHST1O43916 411 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 F12P00748 615 aaPredicted RBP18.64■□□□□ 0.57
CDX1-201ENST00000231656 PAX9P55771 341 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 TCF23Q7RTU1 214 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 ODF3L1Q8IXM7 274 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 TMEM252Q8N6L7 170 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 TCTEX1D1Q8N7M0 179 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 CCL19Q99731 98 aa18.64■□□□□ 0.57
CDX1-201ENST00000231656 C17orf98A8MV24 154 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 TNFRSF13BO14836 293 aaPredicted RBP18.63■□□□□ 0.57
CDX1-201ENST00000231656 TMPRSS2O15393 492 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 P0C879 139 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 CAV2P51636 162 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 Q3ZCU0 254 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 FGFRL1Q8N441 504 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 OR1S2Q8NGQ3 325 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 TCTEX1D2Q8WW35 142 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 PSMG3-AS1Q96PY0 264 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 HSD17B10Q99714 261 aaKnown RBP18.63■□□□□ 0.57
CDX1-201ENST00000231656 SLC25A31Q9H0C2 315 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 PLA2G2EQ9NZK7 142 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 SESN1Q9Y6P5 492 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 FBN2P35556 2912 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 BORCS7-ASMTA0A0B4J1R7 106 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 NKX6-3A6NJ46 265 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 WRBO00258 174 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 EFNA4P52798 201 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 OR2B11Q5JQS5 317 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 SPAG16Q8N0X2 631 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 GINS3Q9BRX5 216 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 LPAR3Q9UBY5 353 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 MMP24Q9Y5R2 645 aa18.63■□□□□ 0.57
CDX1-201ENST00000231656 KBTBD11-OT1A0A1B0GTJ5 212 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 LINC00473A8K010 186 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 FSTL3O95633 263 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 OMGP23515 440 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 RAB9BQ9NP90 201 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 CLN8Q9UBY8 286 aa18.62■□□□□ 0.57
CDX1-201ENST00000231656 TRGV10A0A0A0MS01 117 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 ITGB1BP1O14713 200 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 SHOXO15266 292 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 PROP1O75360 226 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 IGHV2-70P01814 119 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 ZP3P21754 424 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 GPR12P47775 334 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 SULT1A2P50226 295 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 ZNF816Q0VGE8 651 aaPredicted RBP18.61■□□□□ 0.57
CDX1-201ENST00000231656 LYPD2Q6UXB3 125 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 CORO2AQ92828 525 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 LINC00052Q96N35 136 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 IFI27L2Q9H2X8 130 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 LINC00574Q9H8X3 128 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 CHODLQ9H9P2 273 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 GFOD1Q9NXC2 390 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 COA4Q9NYJ1 87 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 PTPN13Q12923 2485 aa18.61■□□□□ 0.57
CDX1-201ENST00000231656 FBXO24O75426 580 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 S1PR2O95136 353 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 ZNF134P52741 427 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 SAT2Q96F10 170 aaPredicted RBP18.6■□□□□ 0.57
CDX1-201ENST00000231656 SMIM8Q96KF7 97 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 RAB40CQ96S21 281 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 ZNF705EA8MWA4 302 aaPredicted RBP18.6■□□□□ 0.57
CDX1-201ENST00000231656 NDUFA2O43678 99 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 LINC00205P59089 165 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 UTF1Q5T230 341 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 TAS2R3Q9NYW6 316 aa18.6■□□□□ 0.57
CDX1-201ENST00000231656 PPIHO43447 177 aaKnown RBP18.59■□□□□ 0.57
CDX1-201ENST00000231656 DUTP33316 252 aaKnown RBP18.59■□□□□ 0.57
CDX1-201ENST00000231656 BAXQ07812 192 aa18.59■□□□□ 0.57
CDX1-201ENST00000231656 AVPI1Q5T686 147 aa18.59■□□□□ 0.57
CDX1-201ENST00000231656 CCDC28AQ8IWP9 274 aa18.59■□□□□ 0.57
CDX1-201ENST00000231656 KAAG1Q9UBP8 84 aa18.59■□□□□ 0.57
CDX1-201ENST00000231656 ZNF729A6NN14 1252 aaPredicted RBP18.58■□□□□ 0.57
CDX1-201ENST00000231656 SLC31A2O15432 143 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 SYNGR2O43760 224 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 SEC11BP0C7V7 166 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 G6PCP35575 357 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 RAB1CQ92928 201 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 MARC2Q969Z3 335 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 TIMD4Q96H15 378 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 DOCK11Q5JSL3 2073 aa18.58■□□□□ 0.57
CDX1-201ENST00000231656 FAM90A26D6RGX4 464 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 TOR1AO14656 332 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 FCN3O75636 299 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 ATG12O94817 140 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 KRASP01116 189 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 SPP1P10451 314 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 RPL23AP62750 156 aaKnown RBP18.58■□□□□ 0.56
CDX1-201ENST00000231656 MIDNQ504T8 468 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 NCR3LG1Q68D85 454 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 NRGNQ92686 78 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 CTSZQ9UBR2 303 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 SLC25A10Q9UBX3 287 aaPredicted RBP18.58■□□□□ 0.56
CDX1-201ENST00000231656 GAB2Q9UQC2 676 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 WSB1Q9Y6I7 421 aa18.58■□□□□ 0.56
CDX1-201ENST00000231656 KRBOX1C9JBD0 128 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 TXNL1O43396 289 aa18.57■□□□□ 0.56
CDX1-201ENST00000231656 MED6O75586 246 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms