RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 WDR13Q9H1Z4 485 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 ALPK2Q86TB3 2170 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 TRAV18A0A075B6X5 111 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 H3BMH7 237 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 CD1AP06126 327 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 CT45A6P0DMU7 189 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 CT45A5P0DMU8 189 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 CT45A7P0DMV0 189 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 RPL18Q07020 188 aaKnown RBP7.12□□□□□ -1.27
SPARC-201ENST00000231061 ATXN7L3Q14CW9 347 aaPredicted RBP7.12□□□□□ -1.27
SPARC-201ENST00000231061 CT45A1Q5HYN5 189 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 CT45A3Q8NHU0 189 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 COQ2Q96H96 371 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 DOCK8Q8NF50 2099 aa7.12□□□□□ -1.27
SPARC-201ENST00000231061 RIF1Q5UIP0 2472 aaKnown RBP7.11□□□□□ -1.27
SPARC-201ENST00000231061 LOC102725191A0A1B0GVB3 256 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 GGT3PA6NGU5 568 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 MFNGO00587 321 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 CHST1O43916 411 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 LINC00694P0DN24 101 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 CD38P28907 300 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 HIST3H3Q16695 136 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TMEM178AQ8NBL3 297 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 PNPLA2Q96AD5 504 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 ADOQ96SZ5 270 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 RASL11BQ9BPW5 248 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 NKX2-4Q9H2Z4 354 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 FBXO4Q9UKT5 387 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TRAV24A0A0B4J272 114 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 KBTBD11-OT1A0A1B0GTJ5 212 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 CDC14CA4D256 554 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 FOXS1O43638 330 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 HLA-AP01891 365 aaKnown RBP7.11□□□□□ -1.27
SPARC-201ENST00000231061 SRP14P37108 136 aaKnown RBP7.11□□□□□ -1.27
SPARC-201ENST00000231061 ROM1Q03395 351 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 RPEL1Q2QD12 228 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 DPPA3Q6W0C5 159 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 IL34Q6ZMJ4 242 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 OR2G3Q8NGZ4 309 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TSPAN32Q96QS1 320 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TMEM9BQ9NQ34 198 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TAS2R5Q9NYW4 299 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
SPARC-201ENST00000231061 SIGLEC9Q9Y336 463 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 EPOPA6NHQ4 379 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 SMIM17P0DL12 118 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 RPS4XP62701 263 aaKnown RBP7.11□□□□□ -1.27
SPARC-201ENST00000231061 DCAF12Q5T6F0 453 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 OR4C16Q8NGL9 310 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 PLPPR1Q8TBJ4 325 aa7.11□□□□□ -1.27
SPARC-201ENST00000231061 TRBV20-1A0A075B6N2 111 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TRAV8-6A0A0B4J262 113 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 IGHV1-69-2A0A0G2JMI3 117 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 A0A1B0GX78 115 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 NDUFB6O95139 128 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 MT-CO3P00414 261 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 CELA3BP08861 270 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 EFNB2P52799 333 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 SLC25A1P53007 311 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 ZXDAP98168 799 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 LRRC10Q5BKY1 277 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 NEGR1Q7Z3B1 354 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 OR5AN1Q8NGI8 311 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 C15orf40Q8WUR7 153 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 MUC21A0A0G2JKD1 596 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 C17orf51A8MQB3 221 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 RAMP1O60894 148 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 IFI6P09912 130 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 HKR1P10072 659 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 IGFBP2P18065 325 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 GABRG2P18507 467 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 MALLQ13021 153 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 HMGN3Q15651 99 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TAL2Q16559 108 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 ZNF260Q3ZCT1 412 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 ZNF626Q68DY1 528 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TMEM184AQ6ZMB5 413 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 ZNF627Q7L945 461 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 CXorf67Q86X51 503 aaPredicted RBP7.1□□□□□ -1.27
SPARC-201ENST00000231061 HEATR5AQ86XA9 2040 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 DEFB119Q8N690 84 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 OR4C13Q8NGP0 309 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
SPARC-201ENST00000231061 HIST1H2AAQ96QV6 131 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 AMELYQ99218 206 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 NRN1Q9NPD7 142 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 FAM206AQ9NX38 181 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 PRSS50Q9UI38 385 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 MAP1BP46821 2468 aaKnown RBP7.1□□□□□ -1.27
SPARC-201ENST00000231061 URB1O60287 2271 aaKnown RBP7.1□□□□□ -1.27
SPARC-201ENST00000231061 A0A0J9YW62 118 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 TMEM212A6NML5 194 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 VSIG10L2P0DP72 767 aa7.1□□□□□ -1.27
SPARC-201ENST00000231061 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms