RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZBTB25P24278 435 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 PTBP1P26599 531 aaKnown RBP eCLIP10.84□□□□□ -0.67
VEGFA-201ENST00000230480 RFX2P48378 723 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 PNLIPRP3Q17RR3 467 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 NRARPQ7Z6K4 114 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 OR5AN1Q8NGI8 311 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 OR2T10Q8NGZ9 312 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 S1PR3Q99500 378 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 SRRQ9GZT4 340 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 ANAPC10Q9UM13 185 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 MGAT4AQ9UM21 535 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 GAB2Q9UQC2 676 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 MOB4Q9Y3A3 225 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 H0YJW9 148 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 TMEM127O75204 238 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 RGS11O94810 467 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 DIRAS3O95661 229 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 MOSP00540 346 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 C1QBP02746 253 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 NAT1P18440 290 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 IL3RAP26951 378 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 TNFSF8P32971 234 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 CD83Q01151 205 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 ARFRP1Q13795 201 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 HES1Q14469 280 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 SNAPC3Q92966 411 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-201ENST00000230480 ST6GALNAC5Q9BVH7 336 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 ZNF107Q9UII5 783 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-201ENST00000230480 LINC00527Q9UJ94 153 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.68
VEGFA-201ENST00000230480 V9GYH0 126 aa10.83□□□□□ -0.68
VEGFA-201ENST00000230480 A0A0A6YYH2 397 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 IGKV1D-13A0A0B4J2D9 117 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 A6NJ64 397 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 RAB29O14966 203 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 BET1O15155 118 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 TXNL1O43396 289 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 XRCC3O43542 346 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 TUSC2O75896 110 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 OR8U9P0C7N5 309 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 IGKV1-13P0DP09 117 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 HTR2BP41595 481 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 RORCP51449 518 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 EIF4EBP1Q13541 118 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-201ENST00000230480 MRGPRG-AS1Q2M3A8 158 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 FAM71F2Q6NXP2 309 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 HOGA1Q86XE5 327 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 NPBQ8NG41 125 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 OR8U1Q8NH10 309 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-201ENST00000230480 MIXL1Q9H2W2 232 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 SDHAF2Q9NX18 166 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 PIPOXQ9P0Z9 390 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 PRELID1Q9Y255 219 aa10.82□□□□□ -0.68
VEGFA-201ENST00000230480 FCN1O00602 326 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 CTDSP2O14595 271 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 NDUFA3O95167 84 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 IGKV1-16P04430 117 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 ELK1P19419 428 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 VDAC2P45880 294 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-201ENST00000230480 GPR12P47775 334 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 ACTBP60709 375 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-201ENST00000230480 CFHR3Q02985 330 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 KIR2DS1Q14954 304 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 FAM131AQ6UXB0 335 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 DDB2Q92466 427 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 KCTD12Q96CX2 325 aaKnown RBP10.81□□□□□ -0.68
VEGFA-201ENST00000230480 ANXA10Q9UJ72 324 aa10.81□□□□□ -0.68
VEGFA-201ENST00000230480 LINC00473A8K010 186 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 M0QZK8 103 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 HPGDSO60760 199 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 IGLV2-23P01705 113 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 FCER2P06734 321 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 EGR2P11161 476 aaPredicted RBP10.8□□□□□ -0.68
VEGFA-201ENST00000230480 NFYAP23511 347 aaPredicted RBP10.8□□□□□ -0.68
VEGFA-201ENST00000230480 ARHGDIBP52566 201 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 TAS2R20P59543 309 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 NDPQ00604 133 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 ARL6IP1Q15041 203 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 C19orf54Q5BKX5 351 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 UBE2NLQ5JXB2 153 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 ZNF660Q6AZW8 331 aaPredicted RBP10.8□□□□□ -0.68
VEGFA-201ENST00000230480 MZT2BQ6NZ67 158 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 CNIH2Q6PI25 160 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 OR5AU1Q8NGC0 362 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 EDARADDQ8WWZ3 215 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 LIN7CQ9NUP9 197 aaKnown RBP10.8□□□□□ -0.68
VEGFA-201ENST00000230480 COMMD3Q9UBI1 195 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 FBXO7Q9Y3I1 522 aa10.8□□□□□ -0.68
VEGFA-201ENST00000230480 PRKDCP78527 4128 aaKnown RBP10.8□□□□□ -0.68
VEGFA-201ENST00000230480 IGHV7-81A0A0B4J1V7 117 aa10.79□□□□□ -0.68
VEGFA-201ENST00000230480 LINC00862A6NCI5 91 aa10.79□□□□□ -0.68
VEGFA-201ENST00000230480 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms