RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 F12P00748 615 aaPredicted RBP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 CD99P14209 185 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 TMEM97Q5BJF2 176 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 LYG1Q8N1E2 194 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 ZNF524Q96C55 264 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 WDR61Q9GZS3 305 aaKnown RBP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 ABCA1O95477 2261 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 TRBV5-5A0A0J9YX44 114 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 TMEM210A6NLX4 147 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 CEACAM6P40199 344 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 POLR2GP62487 172 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 C11orf42Q8N5U0 333 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 POM121L2Q96KW2 1035 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 SPRY4Q9C004 299 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 HLA-DQB1P01920 261 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 RHOBP62745 196 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 NRN1LQ496H8 165 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 NHLRC3Q5JS37 347 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 FGFBP3Q8TAT2 258 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 TMEM56Q96MV1 263 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 SHANK1Q9Y566 2161 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 IGHV2OR16-5A0A0B4J2B6 119 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 M0R2Z0 102 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 SOX15O60248 233 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 EIF3GO75821 320 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 CD1AP06126 327 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 FAM3BP58499 235 aaPredicted RBP8.05□□□□□ -1.12
CCDC113-201ENST00000219299 KCNMB1Q16558 191 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 PECRQ9BY49 303 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 CACNG5Q9UF02 275 aa8.05□□□□□ -1.12
CCDC113-201ENST00000219299 SPINK4O60575 86 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 CLEC3BP05452 202 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 OR5AL1P0C617 328 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PAFAH1B2P68402 229 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 LDLRAD3Q86YD5 345 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 RPRMLQ8N4K4 120 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ADTRPQ96IZ2 230 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 TBX15Q96SF7 602 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 CCL13Q99616 98 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 CRYM-AS1A6NIL9 109 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 GAPDHP04406 335 aaKnown RBP8.04□□□□□ -1.12
CCDC113-201ENST00000219299 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 TMEM11P17152 192 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ATP5J2P56134 94 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 RPL11P62913 178 aaKnown RBP8.04□□□□□ -1.12
CCDC113-201ENST00000219299 DHRS7BQ6IAN0 325 aaPredicted RBP8.04□□□□□ -1.12
CCDC113-201ENST00000219299 OR8B3Q8NGG8 313 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 RPEQ96AT9 228 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 OR8B2Q96RD0 313 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 DIRC2Q96SL1 478 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ZNF665Q9H7R5 613 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 FGF2P09038 288 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 VSIG10L2P0DP72 767 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PRDX2P32119 198 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 AESQ08117 197 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PSG7Q13046 419 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 MPV17LQ2QL34 196 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 CLEC2AQ6UVW9 174 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 MOB3BQ86TA1 216 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 RGP1Q92546 391 aaPredicted RBP8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PLSCR4Q9NRQ2 329 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ANXA10Q9UJ72 324 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 TUBD1Q9UJT1 453 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PRR14LQ5THK1 2151 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 A6NDN8 102 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 CLDN14O95500 239 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 LPAR6P43657 344 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 EWSR1Q01844 656 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC113-201ENST00000219299 FDX2Q6P4F2 183 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ZNF738Q8NE65 137 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 HES4Q9HCC6 221 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 ZDHHC8Q9ULC8 765 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
CCDC113-201ENST00000219299 A0A0G2JNJ9 132 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 SMPD2O60906 423 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 CDS2O95674 445 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 B2MP61769 119 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 DCAF12L2Q5VW00 463 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 IGF2-ASQ6U949 168 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 DHRS11Q6UWP2 260 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 PRSS3P2Q8NHM4 247 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 Q9UFV3 132 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
CCDC113-201ENST00000219299 WIPI2Q9Y4P8 454 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 C11orf94C9JXX5 98 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 FSTP19883 344 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 APOBEC3AP31941 199 aaPredicted RBP8.03□□□□□ -1.12
CCDC113-201ENST00000219299 SRP14P37108 136 aaKnown RBP8.03□□□□□ -1.12
CCDC113-201ENST00000219299 PCP4P48539 62 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 RPL31P62899 125 aaKnown RBP8.03□□□□□ -1.12
CCDC113-201ENST00000219299 Q1RN00 199 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 LINC00596Q86U02 117 aa8.03□□□□□ -1.12
CCDC113-201ENST00000219299 ZCCHC24Q8N2G6 241 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms