RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 S4R3C0 116 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 BMPR1BO00238 502 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 VKORC1L1Q8N0U8 176 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 RAB40CQ96S21 281 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 GREB1Q4ZG55 1949 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 B4DSR2 109 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 IGHV3-11P01762 117 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 HSPB1P04792 205 aaKnown RBP11.7□□□□□ -0.54
SIX4-201ENST00000216513 LIAT1Q6ZQX7 453 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 FA2HQ7L5A8 372 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 PDPNQ86YL7 162 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 SRD5A3Q9H8P0 318 aa11.7□□□□□ -0.54
SIX4-201ENST00000216513 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
SIX4-201ENST00000216513 LOC390937A0A1W2PQ73 354 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 IFI6P09912 130 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 MMD2Q8IY49 270 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 MDS2Q8NDY4 140 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 C12orf57Q99622 126 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 TFF1P04155 84 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
SIX4-201ENST00000216513 CALHM1Q8IU99 346 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 REPIN1Q9BWE0 567 aaKnown RBP11.69□□□□□ -0.54
SIX4-201ENST00000216513 LY6HO94772 140 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 C10orf128Q5T292 105 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 ZNF525Q8N782 197 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
SIX4-201ENST00000216513 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 CCDC88CQ9P219 2028 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 CD24P25063 80 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 PJVKQ0ZLH3 352 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 HSBP1O75506 76 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 SCTP09683 121 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 SSTR5P35346 364 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 NPBWR2P48146 333 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 ZNF107Q9UII5 783 aaPredicted RBP11.69□□□□□ -0.54
SIX4-201ENST00000216513 ST6GALNAC2Q9UJ37 374 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 SLC45A2Q9UMX9 530 aa11.69□□□□□ -0.54
SIX4-201ENST00000216513 ANKRD20A5PA0PJZ0 165 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 CRXO43186 299 aaPredicted RBP11.68□□□□□ -0.54
SIX4-201ENST00000216513 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 RNF2Q99496 336 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
SIX4-201ENST00000216513 VPS25Q9BRG1 176 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 RUNX1Q01196 453 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 SLC25A33Q9BSK2 321 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 ZFHX2Q9C0A1 2572 aaPredicted RBP11.68□□□□□ -0.54
SIX4-201ENST00000216513 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
SIX4-201ENST00000216513 HPRT1P00492 218 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 ORM1P02763 201 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 NPY1RP25929 384 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 TMEM186Q96B77 213 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 DHRS7CA6NNS2 312 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 EMP1P54849 157 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 C10orf113Q5VZT2 155 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 Q9N2K0 584 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 NAT8BQ9UHF3 227 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
SIX4-201ENST00000216513 CD33P20138 364 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 NHLH2Q02577 135 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 SLC16A13Q7RTY0 426 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 ZIC4Q8N9L1 334 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 MYO7BQ6PIF6 2116 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 HIST1H1EP10412 219 aaKnown RBP11.67□□□□□ -0.54
SIX4-201ENST00000216513 MMP9P14780 707 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 ACP7Q6ZNF0 438 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
SIX4-201ENST00000216513 RHBDL1O75783 438 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 NEUROG1Q92886 237 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 RBM38Q9H0Z9 239 aaKnown RBP11.67□□□□□ -0.54
SIX4-201ENST00000216513 A6NNC1 897 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 GZMMP51124 257 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 BRD3OSQ6XYD6 125 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 ARL6IP6Q8N6S5 226 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 OR1L6Q8NGR2 347 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 RCC2Q9P258 522 aaKnown RBP11.67□□□□□ -0.54
SIX4-201ENST00000216513 LOC389332A0A1B0GUA5 103 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 NPIPB11E5RHQ5 1161 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 TMEM127O75204 238 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 MGPP08493 103 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 LIMS1P48059 325 aa11.67□□□□□ -0.54
SIX4-201ENST00000216513 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms