RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gng10Q9CXP8 68 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fxyd6Q9D164 94 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cd300cA2A7V7 229 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 GmlE9PX31 176 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zfp867E9Q2M4 473 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 H2-LP01897 362 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zp3P10761 424 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rpl30P62889 115 aaKnown RBP10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Adam8Q05910 826 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Spata22Q5SV06 358 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 SordQ64442 357 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Q6PIU9 354 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr358Q7TRY5 330 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vash2Q8C5G2 355 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nus1Q99LJ8 297 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Nudt22Q9DD16 308 aa10.67□□□□□ -0.7
Trim56-201ENSMUST00000054384 Trav1A0A075B5Z4 110 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Pate1E9Q658 125 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 ScimpQ3UU41 150 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr324Q5NCC7 333 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Sys1Q78S06 156 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Megf9Q8BH27 600 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem97Q8VD00 176 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1202Q8VF98 309 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr974Q8VH09 310 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Neurl1Q923S6 574 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 EllO08856 602 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Klk1b1P00755 261 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zdhhc8Q5Y5T5 762 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm20815J3KMI0 227 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm20914J3QME2 227 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm21292Q78EE2 227 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr851Q7TRG0 312 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Susd2Q9DBX3 820 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Pla2g12aQ9EPR2 192 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Utf1Q6J1H4 339 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fzr1Q9R1K5 493 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr912A0A1L1SSS5 310 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm14444A2ARW3 426 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Irs3O54718 495 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 4930512M02RikQ5SQK8 218 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ceacam9Q78T27 234 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem222Q8BVA2 208 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc48a1Q9D8M3 146 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ethe1Q9DCM0 254 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm13547A2ARC0 163 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc6a1P31648 599 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ablim2Q8BL65 612 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem9bQ9JJR8 199 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Stard10Q9JMD3 291 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm28171A0A087WQ19 227 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm21783J3QM57 227 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc25a26Q5U680 274 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Msl2Q69ZF8 577 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cldn34c4A2ANA3 212 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ceacam12Q3UKP4 300 aa10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Rbfox2Q8BP71 449 aaKnown RBP10.66□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem262D3Z338 116 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Traf4Q61382 470 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 ApehQ8R146 732 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Zcchc14Q8VIG0 956 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Atp6v1fQ9D1K2 119 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 1700025F22RikQ9D9Y7 111 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 BC025446A0A087WQT1 134 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm12887B1AVM1 119 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r160E9Q346 307 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Vmn1r123L7N270 307 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr481Q8VGI5 312 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Cacna1aP97445 2368 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 FcmrA1KXC4 422 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr102B2RT33 308 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm6904E9PVF1 202 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1220F7BL62 311 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gm21746J3QMM6 180 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Fam240aJ3QNP9 97 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Evx1P23683 416 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Gdf9Q07105 441 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr1383Q7TQT2 311 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tmem27Q9ESG4 222 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Tgfbr3lD3YZZ2 297 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ube2l3P68037 154 aaKnown RBP10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Ttc32Q9DAC7 148 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr894Q9EQB2 313 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Slc37a2Q9WU81 501 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 Olfr46Q8VGJ4 318 aa10.65□□□□□ -0.7
Trim56-201ENSMUST00000054384 1810011H11RikE9PVZ2 95 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Defa30E9QPZ2 93 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Hist1h1dP43277 221 aaKnown RBP10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Defa9P50707 93 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ewsr1Q61545 655 aaKnown RBP10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Igsf21Q7TNR6 468 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Slc25a1Q8JZU2 311 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr960Q8VET5 316 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm12886B1AZM5 119 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prrt2E9PUL5 346 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr609E9Q4X7 319 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prss3Q792Z0 246 aaKnown RBP10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prrg4Q8BGN6 226 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1368Q8VFG3 314 aa10.65□□□□□ -0.71
Trim56-201ENSMUST00000054384 Qrich2A0A140LIY9 2337 aa10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 1207.3 ms