RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Zdbf2Q5SS00 2493 aaKnown RBP14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ndufb11O09111 151 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 PimregQ8BFY7 231 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rps19bp1Q8C6B9 143 aaKnown RBP14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Scgb1b3J3QJY4 93 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Cd46O88174 365 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Mfsd4b3Q3UN21 355 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm21943Q5FWD5 227 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fzd6Q61089 709 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Wnk1P83741 2377 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Cdk2ap1O35207 114 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 P2ry1P49650 373 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 H2-T22Q31615 379 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr843Q7TRG4 313 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fbxo4Q8CHQ0 385 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r89Q8R256 316 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm20815J3KMI0 227 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm20914J3QME2 227 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Hspb1P14602 209 aaKnown RBP14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 1700066B19RikQ3TS39 127 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm21292Q78EE2 227 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 TecrQ9CY27 308 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 McptlQ00356 246 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Opn4Q9QXZ9 521 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Trbv26A0A0B4J1P5 115 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 NgpO08692 167 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 ArsgQ3TYD4 525 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 ArsjQ8BM89 598 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pla2g16Q8R3U1 162 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr129Q8VEY1 330 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Atad5Q4QY64 1826 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Defb28Q3V2L0 89 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr411Q7TRW8 315 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fbxw26Q8BI58 466 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tmem208Q9CR96 173 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ncor2Q9WU42 2472 aaKnown RBP14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gdf1P20863 357 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 PigtQ8BXQ2 582 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1420Q8VF55 309 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm44596A0A0N4SVA0 210 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Klk1b11P15946 261 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr16Q62007 309 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr127Q8VF25 323 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 RrhO35214 337 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1450Q8VF19 325 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Q9CX63 252 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Cldn14Q9Z0S3 239 aa14.82□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Dusp1P28563 367 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slamf7Q8BHK6 333 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Sfxn4Q925N1 313 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Mansc1Q9CR33 414 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 PappaQ8R4K8 1624 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Zfp688E9Q5M9 274 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Mc5rP41149 325 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Dnajc30P59041 219 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1383Q7TQT2 311 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lsm11Q8BUV6 361 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 C130079G13RikQ8BUY2 280 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Cmtm2bQ9DAC0 210 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Frem1Q684R7 2191 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr746E9Q840 314 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 HpnO35453 436 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc46a1Q6PEM8 459 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ttc32Q9DAC7 148 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 A0A286YD13 301 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 P04214 136 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pdcd6P12815 191 aaKnown RBP14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tmem211Q3UUA0 195 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1204Q7TR10 309 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Alkbh7Q9D6Z0 221 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ier2P17950 221 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Adamtsl4Q80T21 1036 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Kazald1Q8BJ66 313 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr124Q8VGW6 315 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 1700008P02RikQ9DAJ8 175 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Med29Q9DB91 199 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm4133K9J7G6 307 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 B4galnt1Q09200 533 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Prss3Q792Z0 246 aaKnown RBP14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Sh2d5Q8JZW5 429 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Kcnmb2Q9CZM9 235 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Arfgef3Q3UGY8 2170 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 BocQ6AZB0 1110 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pitpnc1Q8K4R4 332 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 LgalslQ8VED9 172 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Dnal4Q9DCM4 105 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rsg1A2A825 258 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm8882E9Q7E4 283 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tcstv1O70619 171 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr222Q7TS30 318 aa14.81□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 TrdcA0A0G2JEU3 153 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1118A0A0J9YUE7 307 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm4787B2RUD9 748 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 CtrcQ3SYP2 268 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 CdiptQ8VDP6 213 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Upk3aQ9JKX8 287 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Esp38A8R0X1 80 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 SnrpeP62305 92 aaKnown RBP14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ablim3Q69ZX8 682 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Arid2E9Q7E2 1828 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms