RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Mfsd4b1Q8VCV9 425 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Nmnat3Q99JR6 245 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Znf524Q9D0B1 321 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Tstd3Q9D0B5 157 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 HikeshiQ9DD02 197 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Ldb3Q9JKS4 723 aaKnown RBP8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Klrc3Q9QXN7 221 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Gabrg1Q9R0Y8 465 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Nup210lQ9D2F7 1881 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Gm14288E9Q9W0 88 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Guca2aP33680 116 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Sumo1P63166 101 aaKnown RBP8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Shc1P98083 579 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Q0VG62 139 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Slc25a31Q3V132 320 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Plk3Q60806 631 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Olfr43Q7TRX1 313 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Olfr403Q7TRX2 313 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 CtsoQ8BM88 312 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Vmn1r193Q8R258 319 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Asb10Q91ZT7 467 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Gjc3Q921C1 269 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Lhx9Q9WUH2 397 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Ybx2Q9Z2C8 360 aaKnown RBP8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Esp6A8R0U0 136 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Npy6rQ61212 371 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 CebpeQ6PZD9 281 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Tbpl2Q6SJ95 350 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Olfr504Q7TRU7 318 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Rps19bp1Q8C6B9 143 aaKnown RBP8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 March11Q8CBH7 400 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Mmp17Q9R0S3 578 aa8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 Eif3gQ9Z1D1 320 aaKnown RBP8.78□□□□□ -1
Ldlr-201ENSMUST00000034713 CrebbpP45481 2441 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Tgfbr3O88393 850 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 P01804 111 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Ccl9P51670 122 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Klhdc2Q4G5Y1 406 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Tmem255aQ8BHW5 351 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Olfr1294Q8VGE5 312 aa8.77□□□□□ -1
Ldlr-201ENSMUST00000034713 Zfp109A0A0U1RPC5 652 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr1438-ps1A0A140LHS9 319 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Igkv12-44A0A140T8M2 115 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr1320A2AHM8 319 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 4930444P10RikD3YUR1 185 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 9130019O22RikG3X941 543 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Wnt11P48615 354 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 VegfcP97953 415 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Clpsl2Q3UW21 102 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Eml2Q7TNG5 649 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr1465Q7TQR2 307 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Adprhl1Q8BGK2 353 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Plppr5Q8BJ52 321 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 YbeyQ8CAV0 164 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Map1lc3bQ9CQV6 125 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Mansc1Q9CR33 414 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Ergic1Q9DC16 290 aaKnown RBP8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Defb5Q9EPV9 64 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Isg20Q9JL16 300 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Timm9Q9WV98 89 aaKnown RBP8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Cldn14Q9Z0S3 239 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Ros1Q78DX7 2340 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 4930435E12RikA6X8Z9 381 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Gm6665F6Y363 85 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Vmn1r167G3UW71 315 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Gm20821J3QPJ2 227 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Tnfrsf17O88472 185 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Fut9O88819 359 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 PlauP06869 433 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Rpl29P47915 160 aaKnown RBP8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Q24JP4 165 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Q3U595 105 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 OacylQ8BML2 685 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr1393Q8VFA7 311 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr1038Q8VGS1 319 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Tctex1d2Q9CQ66 144 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Malsu1Q9CWV0 228 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Rcc1lQ9CYF5 461 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Ackr1Q9QUI6 334 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Scn2aA0A0J9YTW6 2006 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Atg2bQ80XK6 2075 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Shank1D3YZU1 2167 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr248E9Q1L6 309 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Gm9602J3QPD5 205 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Olfr203L7N205 307 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Sh2b3O09039 548 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Adam10O35598 749 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Cr2P19070 1025 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Rasl12Q08AT1 266 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Slc38a11Q3USY0 453 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Wfdc5Q4KXB6 126 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Fbxw20Q5U467 468 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Foxb1Q64732 325 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 ClmQ7TSN2 230 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Mob3cQ8BJG4 216 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Scrt2Q8BTH6 311 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Oraov1Q8CH62 137 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Tmem123Q91Z22 195 aa8.77□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Sptbn2Q68FG2 2388 aa8.76□□□□□ -1.01
Ldlr-201ENSMUST00000034713 Ighv1-42A0A0A6YY38 117 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms