RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tex43Q9D9I1 141 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Fgf20Q9ESL9 211 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Crybb1Q9WVJ5 250 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r138D3YTY2 306 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm8693E9PW18 306 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm20821J3QPJ2 227 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm4498K9J7G4 306 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r118L7N273 306 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1341Q7TQV4 312 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Arxes1C0HK79 180 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Arxes2C0HK80 180 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm21788J3QNH3 180 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Dnajc30P59041 219 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1383Q7TQT2 311 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Znf768Q8R0T2 568 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Nit1Q8VDK1 323 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ubtd1Q91WB7 227 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cthrc1Q9D1D6 245 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ppp1caP62137 330 aaKnown RBP12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 HfeP70387 359 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Pla2g16Q8R3U1 162 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Nup37Q9CWU9 326 aa12.5□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr609E9Q4X7 319 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm21820J3KMU2 361 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tra2aQ6PFR5 281 aaKnown RBP12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Bud31Q6PGH1 103 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ankrd9Q8BH83 326 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1269Q8VEZ2 309 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1265Q8VEZ3 309 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr763Q8VGC1 309 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Mrgprb5Q91ZB9 322 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cox20Q9D7J4 117 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Izumo1rQ9EQF4 244 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Dapp1Q9QXT1 280 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Psme4Q5SSW2 1843 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ankrd60A2AMD2 318 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 NotoQ5TIS6 240 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Morn4Q6PGF2 146 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Sdhaf4Q8BTE0 104 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Greb1lB9EJV3 1913 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm13547A2ARC0 163 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm8653K9J7G2 307 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r117L7N2C9 307 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ptger4P32240 513 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ube2l3P68037 154 aaKnown RBP12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Il12rb2P97378 874 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 CyrenQ8BHZ5 157 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Elf5Q8VDK3 253 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Pbp2Q8VIN1 187 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r50Q9EP51 310 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr218E9PWV2 313 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 AesP63002 197 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gdf9Q07105 441 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Foxk2Q3UCQ1 651 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Scgb2b24Q7M747 112 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Smap2Q7TN29 428 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr358Q7TRY5 330 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Wfdc21Q8BTE6 63 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Frem3Q5H8B9 2123 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr1116E9PXB8 307 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Znf296E9Q6W4 445 aaKnown RBP12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r178Q8R2B6 304 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Med25Q8VCB2 745 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Fyttd1Q91Z49 317 aaKnown RBP12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Htr6Q9R1C8 440 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 PdfS4R2K0 231 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r224E9PWK2 298 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Vmn1r127K7N6J5 305 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Obp2aQ8K1H9 176 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Nipsnap1O55125 284 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 P01807 119 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 S100a4P07091 101 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Adamts8P57110 905 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Fam187bQ0VAY3 358 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Tmem251Q8BH26 163 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Rtn4rl1Q8K0S5 445 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Wdr4Q9EP82 413 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Irak1bp1Q9ESJ7 259 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Anxa10Q9QZ10 324 aa12.49□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cbln2Q8BGU2 224 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Asb9Q91ZT8 290 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ier5lQ99J55 406 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Olfr154Q9QY00 318 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Gm21244J3QK38 227 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Cd40P27512 289 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Trmt61aQ80XC2 290 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 A730049H05RikQ8C940 139 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Ufc1Q9CR09 167 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Hspb9Q9DAM3 168 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Slc25a18Q9DB41 320 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Rcl1Q9JJT0 373 aaKnown RBP12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Dock7Q8R1A4 2130 aaKnown RBP12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 C4bP01029 1738 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Baz2aQ91YE5 1889 aaKnown RBP12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Smim18J3QNP2 93 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 A4gntQ14BT6 341 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Plk3Q60806 631 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Alkbh6Q8K2U2 238 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 GpnmbQ99P91 574 aa12.48□□□□□ -0.41
Col5a1-201ENSMUST00000028280 Rbbp6P97868 1790 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms