RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 MARCH1Q8TCQ1 289 aa9.96□□□□□ -0.82
LINC00339-213ENST00000642137 RTN4IP1Q8WWV3 396 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-213ENST00000642137 TOMM40LQ969M1 308 aa9.96□□□□□ -0.82
LINC00339-213ENST00000642137 MRGPRFQ96AM1 343 aa9.96□□□□□ -0.82
LINC00339-213ENST00000642137 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
LINC00339-213ENST00000642137 PRDM13Q9H4Q3 707 aa9.96□□□□□ -0.82
LINC00339-213ENST00000642137 FAM96BQ9Y3D0 163 aa9.96□□□□□ -0.82
LINC00339-213ENST00000642137 A0A0U1RQK1 487 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-213ENST00000642137 PGAM2P15259 253 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 SLC6A1P30531 599 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 CCR6P51684 374 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 SCGB2A2Q13296 93 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-213ENST00000642137 DIAPH2-AS1Q14236 149 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 RBMS2Q15434 407 aaKnown RBP9.95□□□□□ -0.82
LINC00339-213ENST00000642137 SSX2Q16385 188 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 RPL39P5Q59GN2 51 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 ZNF66Q6ZN08 573 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 IL17RELQ6ZVW7 336 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 Q71RC1 249 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-213ENST00000642137 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 CMTM1Q8IZ96 169 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 BCL6BQ8N143 479 aaPredicted RBP9.95□□□□□ -0.82
LINC00339-213ENST00000642137 OR8H3Q8N146 312 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 DYNAPQ8N1N2 210 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 ZDHHC22Q8N966 263 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 POC5Q8NA72 575 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 C17orf50Q8WW18 174 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 ADTRPQ96IZ2 230 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 DPAGT1Q9H3H5 408 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 COPZ2Q9P299 210 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 HILPDAQ9Y5L2 63 aa9.95□□□□□ -0.82
LINC00339-213ENST00000642137 IGHV1-3A0A0C4DH29 117 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 FAM240BA0A1B0GVZ2 78 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 INAFM1C9JVW0 142 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 NDUFB6O95139 128 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 FBP1P09467 338 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 S100GP29377 79 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 THBS3P49746 956 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 ARHGDIBP52566 201 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 RND3P61587 244 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 TAGLNQ01995 201 aaKnown RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 AANATQ16613 207 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 DUSP18Q8NEJ0 188 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 HSD17B10Q99714 261 aaKnown RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
LINC00339-213ENST00000642137 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 C14orf166Q9Y224 244 aaKnown RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 SOX21Q9Y651 276 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-213ENST00000642137 A0A1W2PPI3 338 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 VGLL3A8MV65 326 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 M0R1X1 148 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-213ENST00000642137 TCRBP04435 133 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 SRD5A1P18405 259 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 CD1BP29016 333 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 BRS3P32247 399 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 MC5RP33032 325 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 REG1BP48304 166 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 DYNLT3P51808 116 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 BAMBIQ13145 260 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 HABP2Q14520 560 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-213ENST00000642137 DEFB112Q30KQ8 113 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 ABCA11PQ4W5N1 156 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 Q6YL49 198 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 MOB3BQ86TA1 216 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 THNSL2Q86YJ6 484 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 C5orf66Q9H5L9 145 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 VSIG4Q9Y279 399 aa9.93□□□□□ -0.82
LINC00339-213ENST00000642137 MPPED1O15442 326 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 CRLF1O75462 422 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 RRASP10301 218 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 PIGPP57054 158 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 CATR1Q13166 79 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 PHLDA2Q53GA4 152 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 TCTEX1D1Q8N7M0 179 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 ZNF383Q8NA42 475 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 ENKURQ8TC29 256 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 ZFAND2BQ8WV99 257 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 C22orf15Q8WYQ4 148 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 DDB2Q92466 427 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 CFHR4Q92496 578 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 MRPL20Q9BYC9 149 aaKnown RBP9.92□□□□□ -0.82
LINC00339-213ENST00000642137 OCEL1Q9H607 264 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
LINC00339-213ENST00000642137 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
LINC00339-213ENST00000642137 LINC00473A8K010 186 aa9.91□□□□□ -0.82
LINC00339-213ENST00000642137 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms