RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 NPIPA2E9PIF3 369 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 SSSCA1O60232 199 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 ONECUT2O95948 504 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 NBEAP1P0C6P0 100 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 UCP1P25874 307 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 PSMB3P49720 205 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 COMPP49747 757 aaPredicted RBP5.01□□□□□ -1.61
CASC19-260ENST00000641828 EFNA3P52797 238 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 NXPH1P58417 271 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 MRPS34P82930 218 aaKnown RBP5.01□□□□□ -1.61
CASC19-260ENST00000641828 RHOGP84095 191 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 SHBQ15464 509 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 CLEC12BQ2HXU8 276 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 SPATA45Q537H7 98 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 FNDC7Q5VTL7 733 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 DGAT2L6Q6ZPD8 337 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 RNF144BQ7Z419 303 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 CPEB2Q7Z5Q1 589 aaKnown RBP5.01□□□□□ -1.61
CASC19-260ENST00000641828 TMEM144Q7Z5S9 345 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 LRP11Q86VZ4 500 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 ODF3L1Q8IXM7 274 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 TMEM217Q8N7C4 229 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 TCTEX1D1Q8N7M0 179 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 OR2M7Q8NG81 312 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 OR5B3Q8NH48 314 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 SSC4DQ8WTU2 575 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 FGF14Q92915 247 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 TMEM56Q96MV1 263 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 CCDC3Q9BQI4 270 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 ZNF703Q9H7S9 590 aaPredicted RBP5.01□□□□□ -1.61
CASC19-260ENST00000641828 TUBG2Q9NRH3 451 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 PILRAQ9UKJ1 303 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 HEBP2Q9Y5Z4 205 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 TMEM56-RWDD3S4R434 201 aa5.01□□□□□ -1.61
CASC19-260ENST00000641828 SPAG17Q6Q759 2223 aa5□□□□□ -1.61
CASC19-260ENST00000641828 NBEAQ8NFP9 2946 aa5□□□□□ -1.61
CASC19-260ENST00000641828 TDRD6O60522 2096 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 DSPP15924 2871 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 ARHGAP21Q5T5U3 1957 aa5□□□□□ -1.61
CASC19-260ENST00000641828 C3orf85A0A1B0GTC6 90 aa5□□□□□ -1.61
CASC19-260ENST00000641828 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
CASC19-260ENST00000641828 NPIPB13A6NJU9 1138 aa5□□□□□ -1.61
CASC19-260ENST00000641828 NPIPB5A8MRT5 1133 aa5□□□□□ -1.61
CASC19-260ENST00000641828 TEX22C9J3V5 150 aa5□□□□□ -1.61
CASC19-260ENST00000641828 NPIPB4C9JG80 1138 aa5□□□□□ -1.61
CASC19-260ENST00000641828 M0QZ24 198 aa5□□□□□ -1.61
CASC19-260ENST00000641828 HS3ST1O14792 307 aa5□□□□□ -1.61
CASC19-260ENST00000641828 HYPMO75409 117 aa5□□□□□ -1.61
CASC19-260ENST00000641828 GYPAP02724 150 aa5□□□□□ -1.61
CASC19-260ENST00000641828 HOXB2P14652 356 aa5□□□□□ -1.61
CASC19-260ENST00000641828 CDKN1AP38936 164 aa5□□□□□ -1.61
CASC19-260ENST00000641828 MDH2P40926 338 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 SLC6A8P48029 635 aa5□□□□□ -1.61
CASC19-260ENST00000641828 METAP1P53582 386 aa5□□□□□ -1.61
CASC19-260ENST00000641828 FGF8P55075 233 aaPredicted RBP5□□□□□ -1.61
CASC19-260ENST00000641828 RIPPLY3P57055 190 aa5□□□□□ -1.61
CASC19-260ENST00000641828 PPP1CBP62140 327 aa5□□□□□ -1.61
CASC19-260ENST00000641828 KISS1Q15726 138 aa5□□□□□ -1.61
CASC19-260ENST00000641828 ZNF726P1Q15940 193 aa5□□□□□ -1.61
CASC19-260ENST00000641828 EXT1Q16394 746 aa5□□□□□ -1.61
CASC19-260ENST00000641828 PHLDA2Q53GA4 152 aa5□□□□□ -1.61
CASC19-260ENST00000641828 C1orf185Q5T7R7 199 aa5□□□□□ -1.61
CASC19-260ENST00000641828 TSPO2Q5TGU0 170 aa5□□□□□ -1.61
CASC19-260ENST00000641828 LINC00346Q8IVM7 164 aa5□□□□□ -1.61
CASC19-260ENST00000641828 ZNF695Q8IW36 515 aa5□□□□□ -1.61
CASC19-260ENST00000641828 DEFB124Q8NES8 71 aa5□□□□□ -1.61
CASC19-260ENST00000641828 OR51E1Q8TCB6 317 aa5□□□□□ -1.61
CASC19-260ENST00000641828 GPR146Q96CH1 333 aa5□□□□□ -1.61
CASC19-260ENST00000641828 STARD4Q96DR4 205 aa5□□□□□ -1.61
CASC19-260ENST00000641828 TMEM222Q9H0R3 208 aa5□□□□□ -1.61
CASC19-260ENST00000641828 PARLQ9H300 379 aa5□□□□□ -1.61
CASC19-260ENST00000641828 LIME1Q9H400 295 aa5□□□□□ -1.61
CASC19-260ENST00000641828 PATZ1Q9HBE1 687 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 ZNF286AQ9HBT8 521 aa5□□□□□ -1.61
CASC19-260ENST00000641828 SLC39A9Q9NUM3 307 aa5□□□□□ -1.61
CASC19-260ENST00000641828 HCFC1R1Q9NWW0 138 aa5□□□□□ -1.61
CASC19-260ENST00000641828 MRPL27Q9P0M9 148 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 SH3BGRL2Q9UJC5 107 aa5□□□□□ -1.61
CASC19-260ENST00000641828 NXT1Q9UKK6 140 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 MCTS1Q9ULC4 181 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 PPIAL4AQ9Y536 164 aa5□□□□□ -1.61
CASC19-260ENST00000641828 RBM7Q9Y580 266 aaKnown RBP5□□□□□ -1.61
CASC19-260ENST00000641828 ASXL3Q9C0F0 2248 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 PIGBOS1A0A0B4J2F0 54 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 IGHV1-69-2A0A0G2JMI3 117 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 SHISA7A6NL88 538 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 PATE3B3GLJ2 98 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 MPPED1O15442 326 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 CHST1O43916 411 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 NRASP01111 189 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 KRASP01116 189 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 CRISP2P16562 243 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 ARR3P36575 388 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 Q0VG73 95 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 ZNF154Q13106 437 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 PLPPR5Q32ZL2 321 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 CXorf66Q5JRM2 361 aaPredicted RBP4.99□□□□□ -1.61
CASC19-260ENST00000641828 LY6G5CQ5SRR4 150 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 LDLRAD2Q5SZI1 272 aa4.99□□□□□ -1.61
CASC19-260ENST00000641828 FAM78BQ5VT40 261 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms