RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 OR51A2Q8NGJ7 313 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 OR13C9Q8NGT0 318 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 ZNF671Q8TAW3 534 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 ST8SIA2Q92186 375 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 S100A16Q96FQ6 103 aaKnown RBP7.73□□□□□ -1.17
PHGDH-212ENST00000641247 CHST5Q9GZS9 411 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 FGF23Q9GZV9 251 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-212ENST00000641247 TUBA4BQ9H853 241 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 NIT2Q9NQR4 276 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 C19orf12Q9NSK7 152 aa7.73□□□□□ -1.17
PHGDH-212ENST00000641247 SLC17A2O00624 439 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 NUPL2O15504 423 aaKnown RBP7.72□□□□□ -1.17
PHGDH-212ENST00000641247 NDUFB6O95139 128 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 ACAA1P09110 424 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-212ENST00000641247 CALCBP10092 127 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 SLC25A4P12235 298 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 CXCL2P19875 107 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
PHGDH-212ENST00000641247 ZNF124Q15973 351 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 TMEM42Q69YG0 159 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 ALKAL2Q6UX46 152 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 LYPD6Q86Y78 171 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 FAM185AQ8N0U4 392 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 OR52N4Q8NGI2 321 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 OR5D13Q8NGL4 314 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 DPF1Q92782 380 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 CXorf58Q96LI9 332 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 RBM14Q96PK6 669 aaKnown RBP7.72□□□□□ -1.17
PHGDH-212ENST00000641247 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 STEAP1Q9UHE8 339 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 ETV7Q9Y603 341 aa7.72□□□□□ -1.17
PHGDH-212ENST00000641247 FXYD6-FXYD2A0A087WZ82 144 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 IGKV1-9A0A0C4DH69 117 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 LINC00587B1AMM8 73 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SIGLEC5O15389 551 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 ARPC5O15511 151 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 IFNA17P01571 189 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 MT-ND4LP03901 98 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SNRNP70P08621 437 aaKnown RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 CCL3L1P16619 93 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 BTF3P20290 206 aaKnown RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 HTR2CP28335 458 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 ZNF93P35789 620 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 GDNFP39905 211 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 CEBPDP49716 269 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 LUMP51884 338 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 CAPZA1P52907 286 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 CLDN12P56749 244 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 BLOC1S1P78537 153 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 PDZK1IP1Q13113 114 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 UBE2V2Q15819 145 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 RAB11BQ15907 218 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SSX2Q16385 188 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 ARSJQ5FYB0 599 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 C1orf100Q5SVJ3 147 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 JAGN1Q8N5M9 183 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 CSNK2A3Q8NEV1 391 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 TMEM185AQ8NFB2 350 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 STOML3Q8TAV4 291 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 LGALS14Q8TCE9 139 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 RNF141Q8WVD5 230 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SPSB1Q96BD6 273 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 DUX3Q96PT4 197 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 P2RX4Q99571 388 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 FXYD6Q9H0Q3 95 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 TLNRD1Q9H1K6 362 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 SEBOXQ9HB31 216 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-212ENST00000641247 HRASLSQ9HDD0 168 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 RHBDD3Q9Y3P4 386 aa7.71□□□□□ -1.18
PHGDH-212ENST00000641247 IGKV1D-17A0A075B6S4 117 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 F2RL2O00254 374 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 BCL2L11O43521 198 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 EIF3GO75821 320 aaKnown RBP eCLIP7.7□□□□□ -1.18
PHGDH-212ENST00000641247 CST4P01036 141 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 NRASP01111 189 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 AMY1AP04745 511 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 AMY2AP04746 511 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 EIF4EP06730 217 aaKnown RBP7.7□□□□□ -1.18
PHGDH-212ENST00000641247 HCKP08631 526 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 CHATP28329 748 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 ZP1P60852 638 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 HNF4GQ14541 408 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 KHDC1LQ5JSQ8 128 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 TMEM200BQ69YZ2 307 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 AWAT2Q6E213 333 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 C8orf86Q6ZUL3 223 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 ZNF546Q86UE3 836 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 COMMD1Q8N668 190 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 INO80EQ8NBZ0 244 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-212ENST00000641247 Q8NFD4 153 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 OR8S1Q8NH09 359 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 TNFAIP8L1Q8WVP5 186 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 FAM3DQ96BQ1 224 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 SAT2Q96F10 170 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-212ENST00000641247 ABHD1Q96SE0 405 aa7.7□□□□□ -1.18
PHGDH-212ENST00000641247 S100A13Q99584 98 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms