RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 SSBP3Q9BWW4 388 aaPredicted RBP9.44□□□□□ -0.9
SCN1B-208ENST00000640135 NXF2Q9GZY0 626 aaKnown RBP9.44□□□□□ -0.9
SCN1B-208ENST00000640135 TMEM222Q9H0R3 208 aa9.44□□□□□ -0.9
SCN1B-208ENST00000640135 CTXND1A0A1B0GTU2 59 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 H0Y8G0 127 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 NEURL1O76050 574 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 SPNP16150 400 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 IGHV1-2P23083 117 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 CXorf66Q5JRM2 361 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-208ENST00000640135 LINC00114Q6XXX2 140 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 DYRK2Q92630 601 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 TMEM18Q96B42 140 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 TXNDC17Q9BRA2 123 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 KLK13Q9UKR3 277 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 hCG_38984A0A1B0GV85 526 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 CEACAM18A8MTB9 384 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 KCNAB3O43448 404 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 LRRC75BQ2VPJ9 315 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 FAM74A3Q4VXF1 159 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-208ENST00000640135 AQP3Q92482 292 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 WFDC6Q9BQY6 131 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 PDE6DO43924 150 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 CD1BP29016 333 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 POC1AQ8NBT0 407 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 NOL4LQ96MY1 436 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-208ENST00000640135 IQCF6A8MYZ5 107 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 SCTP09683 121 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 UCP3P55916 312 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 PLAC9Q5JTB6 97 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
SCN1B-208ENST00000640135 AICDAQ9GZX7 198 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 SIRT7Q9NRC8 400 aa9.43□□□□□ -0.9
SCN1B-208ENST00000640135 PATJQ8NI35 1801 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 UBE2V2Q15819 145 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 IGSF11Q5DX21 431 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 PNKDQ8N490 385 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 RFLNBQ8N5W9 214 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 DCTN5Q9BTE1 182 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 OPN4Q9UHM6 478 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 PPOXP50336 477 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 ZNF154Q13106 437 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 CENPVQ7Z7K6 275 aaPredicted RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 QTRT1Q9BXR0 403 aaKnown RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 GPR132Q9UNW8 380 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 A0A0G2JMM0 328 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 A0A1W2PPB8 328 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 A0A1W2PRS3 328 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 KIR3DP1A8MWS1 328 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 NPIPB11E5RHQ5 1161 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 MMP7P09237 267 aaPredicted RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 RELQ04864 619 aaPredicted RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 RCC2Q9P258 522 aaKnown RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 VAX2Q9UIW0 290 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 TUBD1Q9UJT1 453 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 RLFQ13129 1914 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 ARID1AO14497 2285 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 TMEM14DPA8MWL7 114 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 HPXP02790 462 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 RIGQ13278 110 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 LGALSLQ3ZCW2 172 aaPredicted RBP9.42□□□□□ -0.9
SCN1B-208ENST00000640135 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
SCN1B-208ENST00000640135 SPTBP11277 2137 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 SFTA3P0C7M3 94 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
SCN1B-208ENST00000640135 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 DOCK6Q96HP0 2047 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 IGHV3-72A0A0B4J1Y9 119 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 SLC25A17O43808 307 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 RAMP1O60894 148 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 KBTBD11O94819 623 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 P01737 135 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 G0S2P27469 103 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 COL8A1P27658 744 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 GAMTQ14353 236 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 IGKV3D-15A0A087WSY6 115 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 PITX3O75364 302 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
SCN1B-208ENST00000640135 BPIFA4PQ86YQ2 179 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 OSR1Q8TAX0 266 aaPredicted RBP9.41□□□□□ -0.9
SCN1B-208ENST00000640135 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 PPP1R3EQ9H7J1 279 aa9.41□□□□□ -0.9
SCN1B-208ENST00000640135 PGLYRP1O75594 196 aaPredicted RBP9.4□□□□□ -0.9
SCN1B-208ENST00000640135 HLA-DQB1P01920 261 aa9.4□□□□□ -0.9
SCN1B-208ENST00000640135 AMTP48728 403 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms