RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RANGRFQ9HD47 186 aaPredicted RBP9.63□□□□□ -0.87
CLN6-223ENST00000637823 FAM212BQ9NTI7 297 aaPredicted RBP9.63□□□□□ -0.87
CLN6-223ENST00000637823 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
CLN6-223ENST00000637823 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
CLN6-223ENST00000637823 MED13LQ71F56 2210 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 IGHV4-61A0A0C4DH41 118 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 IGHV2-70DA0A0C4DH43 119 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 TOR1AO14656 332 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 PROP1O75360 226 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 CDS2O95674 445 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 IFNA21P01568 189 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 SERPINE2P07093 398 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 GIPP09681 153 aaPredicted RBP9.62□□□□□ -0.87
CLN6-223ENST00000637823 ZNF16P17020 682 aaPredicted RBP9.62□□□□□ -0.87
CLN6-223ENST00000637823 RAP2BP61225 183 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 ARF6P62330 175 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 SRSF4Q08170 494 aaKnown RBP9.62□□□□□ -0.87
CLN6-223ENST00000637823 CD300CQ08708 224 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 BTNL3Q6UXE8 466 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 ODF3L1Q8IXM7 274 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 LYG1Q8N1E2 194 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 Q8N7P7 452 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 OR5M8Q8NGP6 311 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 OR51H1Q8NH63 302 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 ADTRPQ96IZ2 230 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 C18orf12Q96KH6 178 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 S1PR3Q99500 378 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 METTL8Q9H825 291 aaKnown RBP9.62□□□□□ -0.87
CLN6-223ENST00000637823 PRR13Q9NZ81 148 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 KPTNQ9Y664 436 aa9.62□□□□□ -0.87
CLN6-223ENST00000637823 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 DUXBA0A1W2PPF3 345 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 M0R1X1 148 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 SIX6O95475 246 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
CLN6-223ENST00000637823 HOXB5P09067 269 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 RPA2P15927 270 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 USF1P22415 310 aaPredicted RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 PRTN3P24158 256 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 DUTP33316 252 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 H2BFSP57053 126 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 RPL30P62888 115 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 CYCSP99999 105 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 PRSS57Q6UWY2 283 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 GSG1LQ6UXU4 331 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 ZNF695Q8IW36 515 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 BEND2Q8NDZ0 799 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 OR13D1Q8NGV5 346 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 CD300LFQ8TDQ1 290 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 TCTEX1D2Q8WW35 142 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 FYTTD1Q96QD9 318 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 ZNF251Q9BRH9 671 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 CLEC7AQ9BXN2 247 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 CHIAQ9BZP6 476 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 HEXA-AS1Q9H8Q6 139 aa9.61□□□□□ -0.87
CLN6-223ENST00000637823 UNKLQ9H9P5 680 aaKnown RBP9.61□□□□□ -0.87
CLN6-223ENST00000637823 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 IGHV2-26A0A0B4J1V2 119 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 C5orf51A6NDU8 294 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 FAM25EA8MYX2 175 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 CCSO14618 274 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 ADAP1O75689 374 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
CLN6-223ENST00000637823 IL3RAP26951 378 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 KIR2DS2P43631 304 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 LPAR6P43657 344 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 THBS3P49746 956 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 ZNF585BQ52M93 769 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 DCAF12L2Q5VW00 463 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 TMEM268Q5VZI3 342 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 FAM71F2Q6NXP2 309 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 C1orf229Q6ZS94 237 aaPredicted RBP9.6□□□□□ -0.87
CLN6-223ENST00000637823 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 RBPMSQ93062 196 aaKnown RBP9.6□□□□□ -0.87
CLN6-223ENST00000637823 TMEM186Q96B77 213 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 PRELID3BQ9Y3B1 194 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
CLN6-223ENST00000637823 ABCA2Q9BZC7 2435 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 LINC00473A8K010 186 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 IGLV1-47P01700 117 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 C1QBP02746 253 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 ZNF137PP52743 207 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 DVL1P1P54792 670 aaPredicted RBP9.59□□□□□ -0.87
CLN6-223ENST00000637823 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
CLN6-223ENST00000637823 NCR3LG1Q68D85 454 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 SPAG16Q8N0X2 631 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 PNKDQ8N490 385 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 ST6GALNAC6Q969X2 333 aa9.59□□□□□ -0.87
CLN6-223ENST00000637823 C1orf159Q96HA4 380 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms