RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PPP1R27Q86WC6 154 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 GFI1Q99684 422 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 HDHD3Q9BSH5 251 aaPredicted RBP14.26□□□□□ -0.13
CLN6-220ENST00000637450 URM1Q9BTM9 101 aaKnown RBP14.26□□□□□ -0.13
CLN6-220ENST00000637450 OR1A1Q9P1Q5 309 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 RNF150Q9ULK6 438 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 HSF4Q9ULV5 492 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 MGAT4AQ9UM21 535 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
CLN6-220ENST00000637450 IGHV4OR15-8A0A075B7B6 117 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 A0A087WW49 117 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 FOXI3A8MTJ6 420 aaPredicted RBP14.25□□□□□ -0.13
CLN6-220ENST00000637450 ARSBP15848 533 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 TMEM50BP56557 158 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 HLA-DRB3P79483 266 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 IRF3Q14653 427 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 PSG5Q15238 335 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 P2RY14Q15391 338 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 MED22Q15528 200 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 ACTBL2Q562R1 376 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 LIPKQ5VXJ0 399 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 PYHIN1Q6K0P9 492 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 ABHD5Q8WTS1 349 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 EDARADDQ8WWZ3 215 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 PTX4Q96A99 478 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 Q9N2K0 584 aa14.25□□□□□ -0.13
CLN6-220ENST00000637450 C3orf84H3BNL1 204 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 SLC17A2O00624 439 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 HSPA12AO43301 675 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 SCTP09683 121 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 SNRPBP14678 240 aaKnown RBP14.24□□□□□ -0.13
CLN6-220ENST00000637450 SPNP16150 400 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 ACSM6Q6P461 480 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 UNQ5815/PRO19632Q6UWF5 114 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 TMEM91Q6ZNR0 172 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 SBSPONQ8IVN8 264 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 DRAXINQ8NBI3 349 aaPredicted RBP14.24□□□□□ -0.13
CLN6-220ENST00000637450 UFD1Q92890 307 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 TMEM203Q969S6 136 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 RHOVQ96L33 236 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 CLCC1Q96S66 551 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 FAM103A1Q9BTL3 118 aaKnown RBP14.24□□□□□ -0.13
CLN6-220ENST00000637450 VCXQ9H320 206 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 SCN3BQ9NY72 215 aa14.24□□□□□ -0.13
CLN6-220ENST00000637450 METTL1Q9UBP6 276 aaKnown RBP14.24□□□□□ -0.13
CLN6-220ENST00000637450 IGKV1-16P04430 117 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 HSPB1P04792 205 aaKnown RBP14.23□□□□□ -0.13
CLN6-220ENST00000637450 ZNF383Q8NA42 475 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 LFNGQ8NES3 379 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 MS4A10Q96PG2 267 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
CLN6-220ENST00000637450 IGKV1-6A0A0C4DH72 117 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 CA2P00918 260 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 IGHV3-11P01762 117 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 OR8U9P0C7N5 309 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 GP9P14770 177 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 CPEP16870 476 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 LINC00205P59089 165 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 RPS16P62249 146 aaKnown RBP14.22□□□□□ -0.13
CLN6-220ENST00000637450 TPBGQ13641 420 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 FLYWCH2Q96CP2 140 aaKnown RBP14.22□□□□□ -0.13
CLN6-220ENST00000637450 ARHGAP5-AS1Q96IT6 56 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 TSNAXQ99598 290 aaKnown RBP14.22□□□□□ -0.13
CLN6-220ENST00000637450 PECRQ9BY49 303 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 SLA2Q9H6Q3 261 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 C12orf4Q9NQ89 552 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 ZNF221Q9UK13 617 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 AK6Q9Y3D8 172 aaKnown RBP14.22□□□□□ -0.13
CLN6-220ENST00000637450 RYR2Q92736 4967 aa14.22□□□□□ -0.13
CLN6-220ENST00000637450 DYNC2H1Q8NCM8 4307 aaKnown RBP14.22□□□□□ -0.13
CLN6-220ENST00000637450 SPDEFO95238 335 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 TFAP2AP05549 437 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 CD40LGP29965 261 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 VEGFCP49767 419 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 TPPP2P59282 170 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 RPS25P62851 125 aaKnown RBP14.21□□□□□ -0.13
CLN6-220ENST00000637450 RAB11BQ15907 218 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 OR6Q1Q8NGQ2 317 aa14.21□□□□□ -0.13
CLN6-220ENST00000637450 TRDCB7Z8K6 153 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 ARPC1BO15143 372 aaKnown RBP14.2□□□□□ -0.14
CLN6-220ENST00000637450 ARL6IP5O75915 188 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 FRMD6-AS1P0C7T7 363 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 HSMCR30P0CW71 290 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 FXYD3Q14802 87 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 TRAM1Q15629 374 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 PLAC9Q5JTB6 97 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 OVCH2Q7RTZ1 564 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 PDPNQ86YL7 162 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 RCHY1Q96PM5 261 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 CMSS1Q9BQ75 279 aaKnown RBP14.2□□□□□ -0.14
CLN6-220ENST00000637450 DUSP21Q9H596 190 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 RDH8Q9NYR8 311 aa14.2□□□□□ -0.14
CLN6-220ENST00000637450 LDLRAD4O15165 306 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 TRGV3P03979 118 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 CLDN12P56749 244 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 PITPNAQ00169 270 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 C2orf76Q3KRA6 126 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 OR56B1Q8NGI3 324 aa14.19□□□□□ -0.14
CLN6-220ENST00000637450 FAM3DQ96BQ1 224 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms