RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 TTTY12Q9BZ98 90 aa13.62□□□□□ -0.23
CLN5-218ENST00000637397 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
CLN5-218ENST00000637397 CALHM1Q8IU99 346 aa13.62□□□□□ -0.23
CLN5-218ENST00000637397 FAM122AQ96E09 287 aa13.62□□□□□ -0.23
CLN5-218ENST00000637397 LRRC3CA6NJW4 275 aa13.62□□□□□ -0.23
CLN5-218ENST00000637397 COX19Q49B96 90 aa13.62□□□□□ -0.23
CLN5-218ENST00000637397 RCC1LQ96I51 464 aaKnown RBP13.62□□□□□ -0.23
CLN5-218ENST00000637397 ZG16O60844 167 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 EGR1P18146 543 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 SRP14P37108 136 aaKnown RBP13.61□□□□□ -0.23
CLN5-218ENST00000637397 TNFRSF9Q07011 255 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 DCAF10Q5QP82 559 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 STPG1Q5TH74 334 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 MRPL13Q9BYD1 178 aaKnown RBP13.61□□□□□ -0.23
CLN5-218ENST00000637397 AKIRIN1Q9H9L7 192 aaPredicted RBP13.61□□□□□ -0.23
CLN5-218ENST00000637397 NPVFQ9HCQ7 196 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 NAGKQ9UJ70 344 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 DIRC3C9JPN6 131 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 HES3Q5TGS1 186 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 PRSS3P2Q8NHM4 247 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 CHRNA10Q9GZZ6 450 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 PCOLCEQ15113 449 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 TGIF2LXQ8IUE1 241 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 ESPL1Q14674 2120 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 IGHV3OR15-7A0A075B7D8 119 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 TMPRSS2O15393 492 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 AGAP20933 346 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 RPL11P62913 178 aaKnown RBP13.61□□□□□ -0.23
CLN5-218ENST00000637397 COL10A1Q03692 680 aa13.61□□□□□ -0.23
CLN5-218ENST00000637397 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 PDPNQ86YL7 162 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 OR10S1Q8NGN2 331 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 NDFIP1Q9BT67 221 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 IGKV1D-8A0A087WSZ0 117 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 J3QR06 171 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 MIC13Q5XKP0 118 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 FAM117AQ9C073 453 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 GAL3ST2Q9H3Q3 398 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 IL36RNQ9UBH0 155 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 KBTBD11O94819 623 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 TMEM251Q8N6I4 163 aa13.6□□□□□ -0.23
CLN5-218ENST00000637397 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 A0A1W2PN81 502 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 TMEM210A6NLX4 147 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 NHLH1Q02575 133 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 OR2D3Q8NGH3 330 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 Q8WTZ3 238 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 CHCHD2Q9Y6H1 151 aaPredicted RBP13.59□□□□□ -0.23
CLN5-218ENST00000637397 HPRT1P00492 218 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 BRS3P32247 399 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 C11orf42Q8N5U0 333 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 OR2T6Q8NHC8 308 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 MESP1Q9BRJ9 268 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 ZNF552Q9H707 407 aaPredicted RBP13.59□□□□□ -0.23
CLN5-218ENST00000637397 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 FGF5P12034 268 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 ARL16Q0P5N6 197 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 ZNF645Q8N7E2 425 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 PRDX2P32119 198 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 ETFRF1Q6IPR1 90 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 DEFB123Q8N688 67 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 DDA1Q9BW61 102 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 CBLN4Q9NTU7 201 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 PRNDQ9UKY0 176 aa13.59□□□□□ -0.23
CLN5-218ENST00000637397 YTHDF2Q9Y5A9 579 aaKnown RBP13.59□□□□□ -0.23
CLN5-218ENST00000637397 CLDN14O95500 239 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 COX6A1P12074 109 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 HOXA5P20719 270 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 MPZP25189 248 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 WNT5AP41221 380 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 INO80CQ6PI98 192 aaPredicted RBP13.58□□□□□ -0.23
CLN5-218ENST00000637397 C1orf210Q8IVY1 113 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 TIMD4Q96H15 378 aa13.58□□□□□ -0.23
CLN5-218ENST00000637397 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 OR5AL1P0C617 328 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 UCP1P25874 307 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 MFAP2P55001 183 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 PAFAH1B2P68402 229 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 OR8I2Q8N0Y5 310 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 GLRX2Q9NS18 164 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 hCG_38984A0A1B0GV85 526 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 S1PR2O95136 353 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 UCP2P55851 309 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 KCNMB1Q16558 191 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 Q56UQ5 140 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 RND1Q92730 232 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
CLN5-218ENST00000637397 SCN8AQ9UQD0 1980 aa13.58□□□□□ -0.24
CLN5-218ENST00000637397 BMPR1BO00238 502 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms