RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	RPL39P5	Q59GN2	51 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CT45A1	Q5HYN5	189 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	THOC7	Q6I9Y2	204 aa	Known RBP	13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CT45A3	Q8NHU0	189 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	RNASE11	Q8TAA1	199 aa	Known RBP	13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	EDARADD	Q8WWZ3	215 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CORO2A	Q92828	525 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SMIM3	Q9BZL3	60 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	IFI27L2	Q9H2X8	130 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	GFOD1	Q9NXC2	390 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NMB	P08949	121 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	AKR1C2	P52895	323 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	HFE	Q30201	348 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PRAMEF5	Q5TYX0	476 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NCR3LG1	Q68D85	454 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SPAG16	Q8N0X2	631 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CXorf58	Q96LI9	332 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CACNG5	Q9UF02	275 aa		13.09	□□□□□ -0.31
CACNA1A-231	ENST00000636816	USP24	Q9UPU5	2620 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZNF729	A6NN14	1252 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	LEUTX	A8MZ59	168 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	SSSCA1	O60232	199 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TMEM50A	O95807	157 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	SOD3	P08294	240 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TMEM33	P57088	247 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	NHLH2	Q02577	135 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	MSMO1	Q15800	293 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TMEM200B	Q69YZ2	307 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	RPL7L1	Q6DKI1	246 aa	Known RBP	13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	LSM10	Q969L4	123 aa	Known RBP	13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	RBMXL1	Q96E39	390 aa	Known RBP	13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	PLEKHA2	Q9HB19	425 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	IDI2-AS1	Q9NZ38	188 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816	FBXL17	Q9UF56	701 aa		13.08	□□□□□ -0.32
CACNA1A-231	ENST00000636816		A0A1B0GU03	582 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	hADV38S2	A0JD32	116 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	FAM24A	A6NFZ4	105 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	DVL1	O14640	695 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	S1PR2	O95136	353 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	KRAS	P01116	189 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	CCL3L1	P16619	93 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	G6PC	P35575	357 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	P2RY1	P47900	373 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	RPL31	P62899	125 aa	Known RBP	13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	H1FX	Q92522	213 aa	Known RBP	13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZFP57	Q9NU63	452 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZNRD1	Q9P1U0	126 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	AUP1	Q9Y679	476 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	NDUFB3	O43676	98 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	CHST1	O43916	411 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	DUT	P33316	252 aa	Known RBP	13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	GNG10	P50151	68 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	CATR1	Q13166	79 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZNF66	Q6ZN08	573 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	STOML3	Q8TAV4	291 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	LINC00574	Q9H8X3	128 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	WFDC1	Q9HC57	220 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	LINC00312	Q9Y6C7	94 aa		13.07	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TEX46	H3BTG2	121 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816		M0R1X1	148 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	GPR137B	O60478	399 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	PPOX	P50336	477 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	BAP18	Q8IXM2	172 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZNF439	Q8NDP4	499 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	HSD17B10	Q99714	261 aa	Known RBP	13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ABHD14A	Q9BUJ0	271 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	DOCK11	Q5JSL3	2073 aa		13.06	□□□□□ -0.32
CACNA1A-231	ENST00000636816	IGSF23	A1L1A6	192 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	SLC25A6	P12236	298 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TPT1	P13693	172 aa	Known RBP	13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	PAX9	P55771	341 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	LRRC10	Q5BKY1	277 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	C11orf71	Q6IPW1	123 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ODF3L1	Q8IXM7	274 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	ZNF295-AS1	Q8N0V1	137 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	CBLN4	Q9NTU7	201 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	MEF2C	Q06413	473 aa	Predicted RBP	13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	AVPI1	Q5T686	147 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	COMMD7	Q86VX2	200 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	OR2C3	Q8N628	320 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TMED6	Q8WW62	240 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	KAAG1	Q9UBP8	84 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	MMP24	Q9Y5R2	645 aa		13.05	□□□□□ -0.32
CACNA1A-231	ENST00000636816	DANCR	P0C864	163 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	AGA	P20933	346 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	CAV2	P51636	162 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	GPR157	Q5UAW9	335 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	PHYHIPL	Q96FC7	376 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	RAB9B	Q9NP90	201 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TAS2R3	Q9NYW6	316 aa		13.04	□□□□□ -0.32
CACNA1A-231	ENST00000636816	SAA2-SAA4	A0A096LPE2	208 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	TAAR5	O14804	337 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	FCGR3B	O75015	233 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	PRB1	P04280	392 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816		P0C879	139 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	SAA2	P0DJI9	122 aa	Predicted RBP	13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	VAMP2	P63027	116 aa		13.03	□□□□□ -0.32
CACNA1A-231	ENST00000636816	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms