RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 GPR87Q9BY21 358 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 OR51B6Q9H340 312 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 HES4Q9HCC6 221 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 C21orf140B9A014 251 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 C9orf172C9J069 976 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 SMPD2O60906 423 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 IFNA10P01566 189 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 FABP4P15090 132 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 GPX4P36969 197 aaPredicted RBP12.23□□□□□ -0.45
CLN6-215ENST00000636674 PSMB3P49720 205 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 RPL23P62829 140 aaKnown RBP12.23□□□□□ -0.45
CLN6-215ENST00000636674 PLGLB1Q02325 96 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 BEND4Q6ZU67 534 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 C16orf82Q7Z2V1 217 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 OR4X1Q8NH49 305 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
CLN6-215ENST00000636674 SMOC1Q9H4F8 434 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 KIAA2026Q5HYC2 2103 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 TMEM30CPA0ZSE6 113 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 TMEM210A6NLX4 147 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 LRRC30A6NM36 301 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 NXPH2O95156 264 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 RD3LP0DJH9 198 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 PAX1P15863 534 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 CATR1Q13166 79 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 ADIRFQ15847 76 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 PDZD11Q5EBL8 140 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 SPATA46Q5T0L3 261 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 DBX2Q6ZNG2 339 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 OR51G1Q8NGK1 321 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 SNX22Q96L94 193 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 DMXL1Q9Y485 3027 aa12.22□□□□□ -0.45
CLN6-215ENST00000636674 ODAMA1E959 279 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 IQCF6A8MYZ5 107 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 JMJD7P0C870 316 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 PKIAP61925 76 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 PPP1CBP62140 327 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 IGFBP7Q16270 282 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 C3AR1Q16581 482 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 FIP1L1Q6UN15 594 aaKnown RBP12.21□□□□□ -0.45
CLN6-215ENST00000636674 C5orf30Q96GV9 206 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
CLN6-215ENST00000636674 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
CLN6-215ENST00000636674 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.45
CLN6-215ENST00000636674 KLF13Q9Y2Y9 288 aaPredicted RBP12.21□□□□□ -0.45
CLN6-215ENST00000636674 DVL1O14640 695 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 RAMP3O60896 148 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 HAND1O96004 215 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 ZNF883P0CG24 379 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 RAC2P15153 192 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 MDKP21741 143 aaPredicted RBP12.21□□□□□ -0.46
CLN6-215ENST00000636674 MRPL49Q13405 166 aaKnown RBP12.21□□□□□ -0.46
CLN6-215ENST00000636674 GAMTQ14353 236 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 MDS2Q8NDY4 140 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 UBALD1Q8TB05 177 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 GALMQ96C23 342 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 ANAPC16Q96DE5 110 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 ACTR3CQ9C0K3 210 aaPredicted RBP12.21□□□□□ -0.46
CLN6-215ENST00000636674 OR2D2Q9H210 308 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 PARLQ9H300 379 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 C12orf49Q9H741 205 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 SLC25A22Q9H936 323 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 DNAJC13O75165 2243 aa12.21□□□□□ -0.46
CLN6-215ENST00000636674 SMCO3A2RU48 225 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 H7BYZ3 331 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 CDIPTO14735 213 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 RAB29O14966 203 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 VENTXO95231 258 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 CLDN14O95500 239 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 COX5AP20674 150 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 MEOX1P50221 254 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 FAM3BP58499 235 aaPredicted RBP12.2□□□□□ -0.46
CLN6-215ENST00000636674 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
CLN6-215ENST00000636674 C4orf17Q53FE4 359 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR10G9Q8NGN4 311 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR10G7Q8NGN6 311 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 LAMP3Q9UQV4 416 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 LNP1A1A4G5 178 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 HRASP01112 189 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 SP1P08047 785 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 CD55P08174 381 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 FGF7P21781 194 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 G6PCP35575 357 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 GALR1P47211 349 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 PDLIM4P50479 330 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
CLN6-215ENST00000636674 TMEM249Q2WGJ8 235 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 MYPOPQ86VE0 399 aaPredicted RBP12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR1P1Q8NH06 330 aa12.2□□□□□ -0.46
CLN6-215ENST00000636674 OR1L1Q8NH94 360 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms