RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 Q6ZVH6 145 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 BHLHA15Q7RTS1 189 aaPredicted RBP9.17□□□□□ -0.94
CHD2-223ENST00000636306 OR4P4Q8NGL7 312 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 PLPPR1Q8TBJ4 325 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 OR5P3Q8WZ94 311 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 LHX4Q969G2 390 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 TMEM222Q9H0R3 208 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 ZNF160Q9HCG1 818 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 SLC39A9Q9NUM3 307 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 POLR1DQ9Y2S0 133 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 SEC16AO15027 2179 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 A0A1B0GV72 72 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 TAX1BP3O14907 124 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 DNPH1O43598 174 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 VAMP5O95183 116 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 CCL4P13236 92 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 C6orf15Q6UXA7 325 aaPredicted RBP9.17□□□□□ -0.94
CHD2-223ENST00000636306 RPS19BP1Q86WX3 136 aaKnown RBP9.17□□□□□ -0.94
CHD2-223ENST00000636306 CALHM1Q8IU99 346 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 C11orf40Q8WZ69 217 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 SIGLEC12Q96PQ1 595 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 GPER1Q99527 375 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 NRN1Q9NPD7 142 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 LOXL2Q9Y4K0 774 aa9.17□□□□□ -0.94
CHD2-223ENST00000636306 C3orf85A0A1B0GTC6 90 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 C17orf112F2Z3M2 114 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 SLC33A1O00400 549 aaPredicted RBP9.16□□□□□ -0.94
CHD2-223ENST00000636306 GDF9O60383 454 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 OR7C2O60412 319 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 KLF7O75840 302 aaPredicted RBP9.16□□□□□ -0.94
CHD2-223ENST00000636306 HLA-DOBP13765 273 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 IL11P20809 199 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 CCL1P22362 96 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 LGALS7P47929 136 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 MLF1P58340 268 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 RHOBP62745 196 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 LRRC75BQ2VPJ9 315 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 COX19Q49B96 90 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 PHLDA2Q53GA4 152 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 OR10J3Q5JRS4 329 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 SAMD13Q5VXD3 122 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 ZNF695Q8IW36 515 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 SAXO1Q8IYX7 474 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 SELENOHQ8IZQ5 122 aaKnown RBP9.16□□□□□ -0.94
CHD2-223ENST00000636306 FOXN4Q96NZ1 517 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 RAB40CQ96S21 281 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 MCTS1Q9ULC4 181 aaKnown RBP9.16□□□□□ -0.94
CHD2-223ENST00000636306 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
CHD2-223ENST00000636306 RALGAPA1Q6GYQ0 2036 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 A0A1W2PP11 408 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 GAGE12BA1L429 117 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 GRIFINA4D1Z8 144 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 DPRXA6NFQ7 191 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 ZNF850A8MQ14 1090 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 MPPED1O15442 326 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD2-223ENST00000636306 LIFP15018 202 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 GUCA1AP43080 201 aaPredicted RBP9.15□□□□□ -0.94
CHD2-223ENST00000636306 PAX9P55771 341 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 RIPPLY3P57055 190 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 SCGB2A2Q13296 93 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 RNPS1Q15287 305 aaKnown RBP9.15□□□□□ -0.94
CHD2-223ENST00000636306 OTPQ5XKR4 325 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 STUMQ69YW2 141 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 DEFB125Q8N687 156 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 TMEM105Q8N8V8 129 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 OR4F17Q8NGA8 305 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 TMEM186Q96B77 213 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 OR4F4Q96R69 305 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
CHD2-223ENST00000636306 LIME1Q9H400 295 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 CENPMQ9NSP4 180 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 MED29Q9NX70 200 aa9.15□□□□□ -0.94
CHD2-223ENST00000636306 TBL2Q9Y4P3 447 aaKnown RBP9.15□□□□□ -0.94
CHD2-223ENST00000636306 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 CTXND1A0A1B0GTU2 59 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 CHST1O43916 411 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 TMEM50AO95807 157 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 P04436 131 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 SP9P0CG40 484 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 SLC25A6P12236 298 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 ANOS1P23352 680 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 HERV-K104P61576 105 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 HLA-DRB5Q30154 266 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 CXorf66Q5JRM2 361 aaPredicted RBP9.14□□□□□ -0.95
CHD2-223ENST00000636306 TSPO2Q5TGU0 170 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 TMEM164Q5U3C3 297 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 FAM57BQ71RH2 274 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 DOK3Q7L591 496 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 RNF144BQ7Z419 303 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 VASH2Q86V25 355 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 OR4F5Q8NH21 305 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
CHD2-223ENST00000636306 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 RSG1Q9BU20 258 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 VSIRQ9H7M9 311 aa9.14□□□□□ -0.95
CHD2-223ENST00000636306 UBE2J1Q9Y385 318 aaPredicted RBP9.14□□□□□ -0.95
CHD2-223ENST00000636306 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms