RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 NCR3LG1Q68D85 454 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 ZNF66Q6ZN08 573 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 ZNF833PQ6ZTB9 187 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 SGPP2Q8IWX5 399 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 CADM3Q8N126 398 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 PNKDQ8N490 385 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 OR4P4Q8NGL7 312 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 OR10X1Q8NGY0 326 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 MITD1Q8WV92 249 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 ST6GALNAC6Q969X2 333 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 TMEM186Q96B77 213 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 MSI2Q96DH6 328 aaKnown RBP7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 GPHA2Q96T91 129 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 PCGF1Q9BSM1 259 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 OR51J1Q9H342 316 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 HIF1ANQ9NWT6 349 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 BAHCC1Q9P281 2608 aa7.8□□□□□ -1.16
CACNA1A-223ENST00000636058 VPS13CQ709C8 3753 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 ASH1LQ9NR48 2969 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 C3orf85A0A1B0GTC6 90 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 H0Y980 276 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 BUB1B-PAK6H3BSN5 160 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 M0R1X1 148 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 DUS4LO95620 317 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 IFNA2P01563 188 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 OR5AC1P0C628 307 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 ANXA3P12429 323 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 DUTP33316 252 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 GZMKP49863 264 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 RPL30P62888 115 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 KLRD1Q13241 179 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 C11orf88Q6PI97 169 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 OR51H1Q8NH63 302 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 TP53RKQ96S44 253 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 S1PR3Q99500 378 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 HSD17B10Q99714 261 aaKnown RBP7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
CACNA1A-223ENST00000636058 MED13LQ71F56 2210 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 A0A0B4J2A0 478 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 DBX1A6NMT0 343 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 LINC00473A8K010 186 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 LY6LH3BQJ8 138 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 J3QLI3 93 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 TGFAP01135 160 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 ARG1P05089 322 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 UCP1P25874 307 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 IL3RAP26951 378 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 BCAP31P51572 246 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 UBE2E1P51965 193 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 BRWD1-AS2P59051 145 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 RRAS2P62070 204 aaPredicted RBP7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 CATR1Q13166 79 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 TMEM187Q14656 261 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 ANKRD55Q3KP44 614 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 SP6Q3SY56 376 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 LDLRAD2Q5SZI1 272 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 C12orf45Q8N5I9 185 aaPredicted RBP7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 LRTM2Q8N967 370 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 CASTOR1Q8WTX7 329 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 GLYATL2Q8WU03 294 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 CHAC2Q8WUX2 184 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 DDB2Q92466 427 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 PHB2Q99623 299 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 C7orf69Q9H7B7 122 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 LIN7CQ9NUP9 197 aaKnown RBP7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 SHPKQ9UHJ6 478 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 AMMECR1Q9Y4X0 333 aaPredicted RBP7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 AUP1Q9Y679 476 aa7.78□□□□□ -1.16
CACNA1A-223ENST00000636058 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CENPVL3A0A0U1RRI6 287 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 SSNA1O43805 119 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CDS2O95674 445 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 TRAPPC2P0DI81 140 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 TRAPPC2BP0DI82 140 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CT45A6P0DMU7 189 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CT45A5P0DMU8 189 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CT45A7P0DMV0 189 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 ZNF16P17020 682 aaPredicted RBP7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 HTR1DP28221 377 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 THBS3P49746 956 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 LINC00205P59089 165 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 SRPXP78539 464 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 ZNF585BQ52M93 769 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 CYB5R2Q6BCY4 276 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 PDZD9Q8IXQ8 264 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 TCTEX1D1Q8N7M0 179 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 ZNF383Q8NA42 475 aa7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 DRAXINQ8NBI3 349 aaPredicted RBP7.77□□□□□ -1.17
CACNA1A-223ENST00000636058 COQ8AQ8NI60 647 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms