RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 H1FOOQ8IZA3 346 aaPredicted RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 SELENOHQ8IZQ5 122 aaKnown RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 Q8NFD4 153 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 NANOS1Q8WY41 292 aaKnown RBP13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 SLAMF9Q96A28 289 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 ATP5SQ99766 215 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 UFSP2Q9NUQ7 469 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
CLN8-209ENST00000635970 IGLV1-44P01699 117 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 TK1P04183 234 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 MMP7P09237 267 aaPredicted RBP13.04□□□□□ -0.32
CLN8-209ENST00000635970 CXCL1P09341 107 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 SLC25A6P12236 298 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 ZNF32P17041 273 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 RND2P52198 227 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 RPL23AP62750 156 aaKnown RBP13.04□□□□□ -0.32
CLN8-209ENST00000635970 HAGHQ16775 308 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 CMTM1Q8IZ96 169 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 C1orf87Q8N0U7 546 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 ZNF383Q8NA42 475 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 NEUROG1Q92886 237 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 ROS1P08922 2347 aa13.04□□□□□ -0.32
CLN8-209ENST00000635970 TRBV23-1A0A0A0MS06 115 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 ZNF727A8MUV8 499 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 CD3EP07766 207 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 UCP1P25874 307 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 GPX4P36969 197 aaPredicted RBP13.03□□□□□ -0.32
CLN8-209ENST00000635970 DYNLT3P51808 116 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 PIGYQ3MUY2 71 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 HIST3H2BBQ8N257 126 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 P2RX4Q99571 388 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 CISD1Q9NZ45 108 aaKnown RBP13.03□□□□□ -0.32
CLN8-209ENST00000635970 RNF115Q9Y4L5 304 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 POLQO75417 2590 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 A0A1B0GV50 99 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 OR6C6A6NF89 314 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 CLDN34H7C241 214 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 CYB5BO43169 146 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 SSSCA1O60232 199 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 LCATP04180 440 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 ARR3P36575 388 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 ERVFRD-1P60508 538 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
CLN8-209ENST00000635970 NMSQ5H8A3 153 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 RCC1LQ96I51 464 aaKnown RBP13.03□□□□□ -0.32
CLN8-209ENST00000635970 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 ZNF442Q9H7R0 627 aa13.03□□□□□ -0.32
CLN8-209ENST00000635970 VPS13CQ709C8 3753 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 ZNF816-ZNF321PA0A0X1KG74 233 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 SHISA9B4DS77 424 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 H0YL77 283 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 GOSR1O95249 250 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 CYB5R3P00387 301 aaPredicted RBP13.02□□□□□ -0.32
CLN8-209ENST00000635970 IFNA5P01569 189 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 S100GP29377 79 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 PCBD1P61457 104 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 PKIAP61925 76 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 STX12Q86Y82 276 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 OR5D13Q8NGL4 314 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 PRDM13Q9H4Q3 707 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 PDZD2O15018 2839 aa13.02□□□□□ -0.32
CLN8-209ENST00000635970 AKAP6Q13023 2319 aa13.02□□□□□ -0.33
CLN8-209ENST00000635970 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 KIR2DS1A0A191URI9 304 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 ADAM20O43506 726 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 CCL2P13500 99 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 CD200P41217 278 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 NPBWR2P48146 333 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 KIR2DS1Q14954 304 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 OR2AE1Q8NHA4 323 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 ABHD14AQ9BUJ0 271 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 UBTD1Q9HAC8 227 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 hCG_38984A0A1B0GV85 526 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 TSTD3H0UI37 97 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 TRGC2P03986 189 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 OPN1MWP04001 364 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 OPN1MW2P0DN77 364 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 OPN1MW3P0DN78 364 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 FOSL1P15407 271 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 PSG4Q00888 419 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 PMS2P11Q13670 270 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
CLN8-209ENST00000635970 SAXO1Q8IYX7 474 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms