RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 PMP22Q01453 160 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 PAX5Q02548 391 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 WDR25Q64LD2 544 aaPredicted RBP10.69□□□□□ -0.7
LINC00540-203ENST00000631321 TMPRSS7Q7RTY8 843 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 C1orf162Q8NEQ5 155 aaPredicted RBP10.69□□□□□ -0.7
LINC00540-203ENST00000631321 CEBPZOSA8MTT3 80 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BKO60814 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 YIF1AO95070 293 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 S1PR2O95136 353 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 KRASP01116 189 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BJP06899 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BOP23527 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BBP33778 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 ELLP55199 621 aaPredicted RBP10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BDP58876 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BCP62807 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 AESQ08117 197 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST2H2BEQ16778 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.69□□□□□ -0.7
LINC00540-203ENST00000631321 OR8G2PQ6IF36 304 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 Q6ZR03 302 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 ZNF826PQ6ZT77 177 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 C1orf87Q8N0U7 546 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 GCNT2Q8N0V5 402 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BHQ93079 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 LURAP1Q96LR2 239 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BNQ99877 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 HIST1H2BMQ99879 126 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 CTDSP1Q9GZU7 261 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 SLC39A9Q9NUM3 307 aa10.69□□□□□ -0.7
LINC00540-203ENST00000631321 A0A1B0GWJ7 208 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 C17orf98A8MV24 154 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 CYB5BO43169 146 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 ZNF737O75373 536 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 MBP02144 154 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 ZNF816Q0VGE8 651 aaPredicted RBP10.68□□□□□ -0.7
LINC00540-203ENST00000631321 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
LINC00540-203ENST00000631321 ACSM6Q6P461 480 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 WDR82Q6UXN9 313 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 ZNF66Q6ZN08 573 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 ZNF808Q8N4W9 903 aaPredicted RBP10.68□□□□□ -0.7
LINC00540-203ENST00000631321 LHX4Q969G2 390 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 FAM210BQ96KR6 192 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 CIB3Q96Q77 187 aaPredicted RBP10.68□□□□□ -0.7
LINC00540-203ENST00000631321 TAAR6Q96RI8 345 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 MIOXQ9UGB7 285 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 WISP2O76076 250 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 KIR2DL2P43627 348 aaPredicted RBP10.68□□□□□ -0.7
LINC00540-203ENST00000631321 NDUFA6P56556 154 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 CD81P60033 236 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 NINJ1Q92982 152 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 TRIB1Q96RU8 372 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 LAMP3Q9UQV4 416 aa10.68□□□□□ -0.7
LINC00540-203ENST00000631321 CTXND1A0A1B0GTU2 59 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 PHOX2AO14813 284 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 OPN1MWP04001 364 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 CD55P08174 381 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 OPN1MW2P0DN77 364 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 OPN1MW3P0DN78 364 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 MDKP21741 143 aaPredicted RBP10.67□□□□□ -0.7
LINC00540-203ENST00000631321 CYP2G1PQ6ZSU1 146 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 CXorf67Q86X51 503 aaPredicted RBP10.67□□□□□ -0.7
LINC00540-203ENST00000631321 MRGPRDQ8TDS7 321 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 DTD1Q8TEA8 209 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 GGACTQ9BVM4 153 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 CLN8Q9UBY8 286 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 WDFY4Q6ZS81 3184 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 SEC14L6B5MCN3 397 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 TMEM250H0YL14 139 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 IGHV2-70P01814 119 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 TRGC2P03986 189 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 GABRA2P47869 451 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
LINC00540-203ENST00000631321 OR2B11Q5JQS5 317 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 BEND4Q6ZU67 534 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 HSD17B10Q99714 261 aaKnown RBP10.67□□□□□ -0.7
LINC00540-203ENST00000631321 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
LINC00540-203ENST00000631321 AQP7O14520 342 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 PTBP3O95758 552 aaKnown RBP10.66□□□□□ -0.7
LINC00540-203ENST00000631321 IGLV1-44P01699 117 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 CD82P27701 267 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 HOXC12P31275 282 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 GNB2P62879 340 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 HTD2P86397 168 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 COL10A1Q03692 680 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 SMIM21Q3B7S5 101 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 AARDQ4LEZ3 155 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 SPNS3Q6ZMD2 512 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 OR10P1Q8NGE3 313 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
LINC00540-203ENST00000631321 C15orf65H3BRN8 121 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 ZG16O60844 167 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 KBTBD11O94819 623 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 AGFG2O95081 481 aa10.66□□□□□ -0.7
LINC00540-203ENST00000631321 FGF7P21781 194 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms