RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NDUFS7O75251 213 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 PGLYRP1O75594 196 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 IFNA21P01568 189 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 HOXB5P09067 269 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 OMGP23515 440 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 CYCSP99999 105 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 CYB5R2Q6BCY4 276 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF645Q8N7E2 425 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 LRTM2Q8N967 370 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 FAM216AQ8WUB2 273 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 H1FXQ92522 213 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 RAB1CQ92928 201 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 SEC22AQ96IW7 307 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 YPEL2Q96QA6 119 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 OR2D2Q9H210 308 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 LINC00574Q9H8X3 128 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 C19orf12Q9NSK7 152 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 TAS2R3Q9NYW6 316 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 COMMD9Q9P000 198 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 ARHGAP32A7KAX9 2087 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 H0Y980 276 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 PPIHO43447 177 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 B3GALNT1O75752 331 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 MMP23AO75900 390 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 F2RP25116 425 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 FGL1Q08830 312 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 IL15RAQ13261 267 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM249Q2WGJ8 235 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM30BQ3MIR4 351 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 MORN2Q502X0 79 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF841Q6ZN19 808 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 C9orf62Q8N4C0 152 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 DRAM1Q8N682 238 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 ZBTB34Q8NCN2 500 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 GRPEL2Q8TAA5 225 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 OR10C1Q96KK4 312 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM222Q9H0R3 208 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 GAL3ST2Q9H3Q3 398 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 CHODLQ9H9P2 273 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 MALRD1Q5VYJ5 2156 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 PIGBOS1A0A0B4J2F0 54 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 PROP1O75360 226 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 WNT2P09544 360 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF134P52741 427 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM33P57088 247 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 ERVFRD-1P60508 538 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF273Q14593 569 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 MSMO1Q15800 293 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 AVPI1Q5T686 147 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 OR51H1Q8NH63 302 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 PPP1R1CQ8WVI7 109 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 C17orf50Q8WW18 174 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF714Q96N38 554 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 NMES1Q9C002 83 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 LIN7CQ9NUP9 197 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 GFOD1Q9NXC2 390 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 IDI2-AS1Q9NZ38 188 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 MIOXQ9UGB7 285 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 RNF150Q9ULK6 438 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
PDLIM5-223ENST00000627587 IGHV4-30-2A0A087WSY4 118 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TRBV23-1A0A0A0MS06 115 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 GPR37O15354 613 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 ST8SIA5O15466 376 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 UCP1P25874 307 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 EFNA4P52798 201 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 BRWD1-AS2P59051 145 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 IFITM2Q01629 132 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 LRRC37A5PQ49AS3 106 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM268Q5VZI3 342 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 GGNBP1Q5YKI7 109 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 LYZL2Q7Z4W2 148 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 OR10A7Q8NGE5 316 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 OR8B3Q8NGG8 313 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 OR52M1Q8NGK5 317 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 FAM168AQ92567 244 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 C2orf50Q96LR7 162 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM56Q96MV1 263 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 OR8B2Q96RD0 313 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMED3Q9Y3Q3 217 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM56-RWDD3S4R434 201 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 ITGB1BP1O14713 200 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 SLC31A2O15432 143 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 SNAPC5O75971 98 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 CDS2O95674 445 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 SERPINE2P07093 398 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 CCL3L1P16619 93 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 NFYBP25208 207 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 RAB7AP51149 207 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 DLX6P56179 175 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 CATR1Q13166 79 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 LGALSLQ3ZCW2 172 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM200BQ69YZ2 307 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 FAM219AQ8IW50 185 aa7.79□□□□□ -1.16
PDLIM5-223ENST00000627587 SLC35G3Q8N808 338 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms