RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SOCS1O15524 211 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 DLEU1O43261 78 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 OR3A4PP47883 348 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 SURF2Q15527 256 aaPredicted RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 C20orf196Q8IYI0 205 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 ISOC2Q96AB3 205 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 PINX1Q96BK5 328 aaKnown RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 STARD4Q96DR4 205 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 PIK3IP1Q96FE7 263 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 CPNE2Q96FN4 548 aaPredicted RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 LINC00470Q9BZP3 86 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 PNRC2Q9NPJ4 139 aaKnown RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 F8VVB4 439 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 F8VWA3 439 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 CA11O75493 328 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 IGHV3-9P01782 118 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 SSTR5P35346 364 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 CEACAM6P40199 344 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 DEFA5Q01523 94 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 FAM74A1Q5RGS3 127 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 TSPO2Q5TGU0 170 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 FBXW9Q5XUX1 488 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 PEG10Q86TG7 708 aaKnown RBP9.79□□□□□ -0.84
LINC00538-201ENST00000626109 BAP18Q8IXM2 172 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 OR5AP2Q8NGF4 316 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 OR13D1Q8NGV5 346 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 OR10X1Q8NGY0 326 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 OR14K1Q8NGZ2 314 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 TMEM54Q969K7 222 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 ALKBH3Q96Q83 286 aaPredicted RBP9.79□□□□□ -0.84
LINC00538-201ENST00000626109 SPACA5Q96QH8 159 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 BANF2Q9H503 90 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 ALPK2Q86TB3 2170 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 FAM208BQ5VWN6 2430 aa9.79□□□□□ -0.84
LINC00538-201ENST00000626109 DOCK7Q96N67 2140 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 PHF3Q92576 2039 aaKnown RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 A0A0A6YYD4 124 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF587BE7ETH6 402 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MFNGO00587 321 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MSTNO14793 375 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 DHRS3O75911 302 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 CGAP01215 116 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 PGAM2P15259 253 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 CHRNB4P30926 498 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 CDX1P47902 265 aaPredicted RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 TMEM50BP56557 158 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 KISS1Q15726 138 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SOHLH1Q5JUK2 328 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 C10orf128Q5T292 105 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 EIF5AL1Q6IS14 154 aaKnown RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SLC30A7Q8NEW0 376 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 NARS2Q96I59 477 aaKnown RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 ARHGAP5-AS1Q96IT6 56 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 C1orf147Q96MC9 270 aaPredicted RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 WDR13Q9H1Z4 485 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 GPR173Q9NS66 373 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SLC7A10Q9NS82 523 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SPENQ96T58 3664 aaKnown RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 TAAR5O14804 337 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 FGF16O43320 207 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 AGFG2O95081 481 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 TIMM23BQ5SRD1 257 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 PRSS54Q6PEW0 395 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 UNQ6126/PRO20091Q6UXV3 157 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MRGPRGQ86SM5 289 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MED12LQ86YW9 2145 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 TMEM217Q8N7C4 229 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 OR4D5Q8NGN0 318 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 OR4A4PQ8NGN8 299 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 ARL11Q969Q4 196 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 SPTSSAQ969W0 71 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 C2orf50Q96LR7 162 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 C5orf66Q9H5L9 145 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 Q9N2K0 584 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 C14orf166Q9Y224 244 aaKnown RBP9.78□□□□□ -0.84
LINC00538-201ENST00000626109 V9GYS6 101 aa9.78□□□□□ -0.84
LINC00538-201ENST00000626109 PRRC2CQ9Y520 2896 aaKnown RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 POLEQ07864 2286 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 FARS2O95363 451 aaKnown RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 CSN3P07498 182 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 OR8U9P0C7N5 309 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF84P51523 738 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 IDH3GP51553 393 aaPredicted RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF133P52736 654 aaPredicted RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 MRPS34P82930 218 aaKnown RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 Q6ZT83 130 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 SVBPQ8N300 66 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 TCEAL7Q9BRU2 100 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
LINC00538-201ENST00000626109 EHFQ9NZC4 300 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 ZNF319Q9P2F9 582 aa9.77□□□□□ -0.85
LINC00538-201ENST00000626109 F5H5K5 113 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
LINC00538-201ENST00000626109 IGLV3-1P01715 115 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms