RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 HLA-DRB3P79483 266 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 ARFRP1Q13795 201 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 KIR2DS1Q14954 304 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 ARL6IP1Q15041 203 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 MMDQ15546 238 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 ZNF880Q6PDB4 577 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 ZNF773Q6PK81 442 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 C5orf24Q7Z6I8 188 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 COMMD1Q8N668 190 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 NUDT10Q8NFP7 164 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 OR10R2Q8NGX6 335 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 WIPF2Q8TF74 440 aaPredicted RBP5.06□□□□□ -1.6
TCF4-249ENST00000625716 NUDT11Q96G61 164 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 KCTD7Q96MP8 289 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 HDHD3Q9BSH5 251 aaPredicted RBP5.06□□□□□ -1.6
TCF4-249ENST00000625716 CENPOQ9BU64 300 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 MRPL20Q9BYC9 149 aaKnown RBP5.06□□□□□ -1.6
TCF4-249ENST00000625716 ATG5Q9H1Y0 275 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 Q9N2K0 584 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 VCX3AQ9NNX9 186 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 TXNL4BQ9NX01 149 aaKnown RBP5.06□□□□□ -1.6
TCF4-249ENST00000625716 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 SLC23A1Q9UHI7 598 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 LINC00527Q9UJ94 153 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 ZNF221Q9UK13 617 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 KIAA2026Q5HYC2 2103 aa5.06□□□□□ -1.6
TCF4-249ENST00000625716 TET2Q6N021 2002 aaPredicted RBP5.06□□□□□ -1.6
TCF4-249ENST00000625716 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 LOC100506127A0A0U1RQW1 187 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 SMIM30A4D0T7 59 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ZNF736B4DX44 427 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 H7C2Y5 167 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ITGB1BP1O14713 200 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 BET1O15155 118 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 LDLRAD4O15165 306 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 SCGNO76038 276 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 SLPIP03973 132 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 SAA2P0DJI9 122 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 OR5H8P0DN80 308 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 GNB3P16520 340 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 FGF9P31371 208 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 GPR12P47775 334 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 OR3A3P47888 321 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 SERPINB10P48595 397 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 F2RL1P55085 397 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ACTBP60709 375 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 PLGLAQ15195 96 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 NEDD8Q15843 81 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 PNLIPRP3Q17RR3 467 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 KCTD21Q4G0X4 260 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 FAM71F2Q6NXP2 309 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 TEX38Q6PEX7 206 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ZNF833PQ6ZTB9 187 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ZNF329Q86UD4 541 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 STPG2Q8N412 459 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 Q8N6K4 173 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 Q8N9W7 124 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 OR4A4PQ8NGN8 299 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 OR10J5Q8NHC4 309 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 PTX4Q96A99 478 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 NOL4LQ96MY1 436 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 CHCHD6Q9BRQ6 235 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 GINS4Q9BRT9 223 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 C11orf54Q9H0W9 315 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 ABCG5Q9H222 651 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ZFP57Q9NU63 452 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 ZNF107Q9UII5 783 aaPredicted RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 DAPK2Q9UIK4 370 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 RNF150Q9ULK6 438 aa5.05□□□□□ -1.6
TCF4-249ENST00000625716 RBM7Q9Y580 266 aaKnown RBP5.05□□□□□ -1.6
TCF4-249ENST00000625716 A0A087WXM4 84 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 OR5H14A6NHG9 310 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 FOXI3A8MTJ6 420 aaPredicted RBP5.04□□□□□ -1.6
TCF4-249ENST00000625716 NBR2O15453 112 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 FABP7O15540 132 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 TNFAIP8O95379 198 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 APOA2P02652 100 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 SCTP09683 121 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 SLC2A2P11168 524 aaPredicted RBP5.04□□□□□ -1.6
TCF4-249ENST00000625716 HIST1H1DP16402 221 aaKnown RBP5.04□□□□□ -1.6
TCF4-249ENST00000625716 CD36P16671 472 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 SLC6A1P30531 599 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 SDC2P34741 201 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 MXD1Q05195 221 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 PLA2G7Q13093 441 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 CBX3Q13185 183 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 MOGAT2Q3SYC2 334 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 TIMM50Q3ZCQ8 353 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 CDNFQ49AH0 187 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 PDLIM3Q53GG5 364 aaPredicted RBP5.04□□□□□ -1.6
TCF4-249ENST00000625716 RPL39P5Q59GN2 51 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 TCTEX1D4Q5JR98 221 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 CXorf66Q5JRM2 361 aaPredicted RBP5.04□□□□□ -1.6
TCF4-249ENST00000625716 PLAC9Q5JTB6 97 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 LIN54Q6MZP7 749 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 TMEM65Q6PI78 240 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 C10orf99Q6UWK7 81 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 ABHD14BQ96IU4 210 aa5.04□□□□□ -1.6
TCF4-249ENST00000625716 CYYR1Q96J86 154 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms