RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 LHX4Q969G2 390 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 GALMQ96C23 342 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 P2RX4Q99571 388 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 OBP2BQ9NPH6 170 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 SLC39A9Q9NUM3 307 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 GAR1Q9NY12 217 aaKnown RBP9.46□□□□□ -0.89
VARS2-213ENST00000625423 CLN8Q9UBY8 286 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 J3QW42 95 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 TNFSF15O95150 251 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 CD59P13987 128 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 RAC2P15153 192 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 S100A2P29034 98 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 IL2RGP31785 369 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 RPS16P62249 146 aaKnown RBP9.46□□□□□ -0.9
VARS2-213ENST00000625423 PMP22Q01453 160 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 ACSF3Q4G176 576 aaPredicted RBP9.46□□□□□ -0.9
VARS2-213ENST00000625423 C1orf87Q8N0U7 546 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 PARD6GQ9BYG4 376 aaPredicted RBP9.46□□□□□ -0.9
VARS2-213ENST00000625423 TMEM30CPA0ZSE6 113 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 ARG2P78540 354 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 BTNL3Q6UXE8 466 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 ABHD5Q8WTS1 349 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 FRZBQ92765 325 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 TMEM242Q9NWH2 141 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 HSPB7Q9UBY9 170 aa9.46□□□□□ -0.9
VARS2-213ENST00000625423 ODAMA1E959 279 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 S1PR2O95136 353 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 IFNA1P01562 189 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 TRGC1P0CF51 173 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 RND2P52198 227 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 NKX6-1P78426 367 aaPredicted RBP9.45□□□□□ -0.9
VARS2-213ENST00000625423 C4orf17Q53FE4 359 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 FAM209BQ5JX69 171 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 WDR25Q64LD2 544 aaPredicted RBP9.45□□□□□ -0.9
VARS2-213ENST00000625423 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 ACSM6Q6P461 480 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 KLF14Q8TD94 323 aaPredicted RBP9.45□□□□□ -0.9
VARS2-213ENST00000625423 CACNA1DQ01668 2161 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 C17orf98A8MV24 154 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 HBZP02008 142 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 SOD3P08294 240 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 BRWD1-AS2P59051 145 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 CD81P60033 236 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 TGFBR3Q03167 851 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 GMPPAQ96IJ6 420 aaPredicted RBP9.45□□□□□ -0.9
VARS2-213ENST00000625423 GPR61Q9BZJ8 451 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 SLC25A22Q9H936 323 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 CHD3Q12873 2000 aaKnown RBP9.45□□□□□ -0.9
VARS2-213ENST00000625423 GTF3C1Q12789 2109 aa9.45□□□□□ -0.9
VARS2-213ENST00000625423 MLNRO43193 412 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 MSMO1Q15800 293 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 GABRA6Q16445 453 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 FIP1L1Q6UN15 594 aaKnown RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 Q6ZR03 302 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 TPRX1Q8N7U7 411 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 OR10D4PQ8NGN7 298 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 OR13D1Q8NGV5 346 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 MRGPRDQ8TDS7 321 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 HES4Q9HCC6 221 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 SEC14L6B5MCN3 397 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 ZG16O60844 167 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 AGFG2O95081 481 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 P0C879 139 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 LINC00205P59089 165 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 ZBTB34Q8NCN2 500 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 SMIM7Q9BQ49 75 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 OOEPA6NGQ2 149 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 TMEM210A6NLX4 147 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 CDX4O14627 284 aaPredicted RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 GABRA2P47869 451 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 MEF2BQ02080 365 aaPredicted RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 EIF4EBP1Q13541 118 aaPredicted RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 ADIRFQ15847 76 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 SPINK9Q5DT21 86 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 NINJ1Q92982 152 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 COQ2Q96H96 371 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 ZDHHC11Q9H8X9 412 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.44□□□□□ -0.9
VARS2-213ENST00000625423 UFSP2Q9NUQ7 469 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 NBASA2RRP1 2371 aa9.44□□□□□ -0.9
VARS2-213ENST00000625423 IGHV3-43A0A0B4J1X8 118 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 IGHV3-43DP0DP04 118 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 CATR1Q13166 79 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 PRAMEF6Q5VXH4 476 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 HIST3H2BBQ8N257 126 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 RPUSD4Q96CM3 377 aaKnown RBP9.43□□□□□ -0.9
VARS2-213ENST00000625423 FZR1Q9UM11 496 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 RBMXL2O75526 392 aaKnown RBP9.43□□□□□ -0.9
VARS2-213ENST00000625423 FGF7P21781 194 aa9.43□□□□□ -0.9
VARS2-213ENST00000625423 TFF3Q07654 80 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms