RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 C11orf54Q9H0W9 315 aaPredicted RBP16.03■□□□□ 0.16
R3HCC1-210ENST00000625275 RANBP3Q9H6Z4 567 aaPredicted RBP16.03■□□□□ 0.16
R3HCC1-210ENST00000625275 RAB18Q9NP72 206 aa16.03■□□□□ 0.16
R3HCC1-210ENST00000625275 BUB1B-PAK6H3BSN5 160 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 ST8SIA5O15466 376 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 TUSC2O75896 110 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 CD74P04233 296 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 TBPP20226 339 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 FCGR2CP31995 323 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 C2orf68Q2NKX9 166 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 RNASE10Q5GAN6 216 aaKnown RBP16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 VAX1Q5SQQ9 334 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 OR4D10Q8NGI6 311 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 OR10X1Q8NGY0 326 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 AGMATQ9BSE5 352 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 WDR12Q9GZL7 423 aaKnown RBP16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 TINAGL1Q9GZM7 467 aaPredicted RBP16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 IFI27L2Q9H2X8 130 aa16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 TBL2Q9Y4P3 447 aaKnown RBP16.02■□□□□ 0.15
R3HCC1-210ENST00000625275 ITGB1BP1O14713 200 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 HTR1DP28221 377 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 PPP5CP53041 499 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF846Q147U1 533 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF660Q6AZW8 331 aaPredicted RBP16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 STEAP1BQ6NZ63 245 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 LIAT1Q6ZQX7 453 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 SIGLEC9Q9Y336 463 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 OR2W1Q9Y3N9 320 aa16.01■□□□□ 0.15
R3HCC1-210ENST00000625275 CHST1O43916 411 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 RAB3DO95716 219 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 IL7P13232 177 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 CD40LGP29965 261 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 KLF9Q13886 244 aaPredicted RBP16■□□□□ 0.15
R3HCC1-210ENST00000625275 MINOS1Q5TGZ0 78 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 TRIQKQ629K1 86 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 FAAP20Q6NZ36 180 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 C11orf88Q6PI97 169 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 ODF3L1Q8IXM7 274 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 LYG1Q8N1E2 194 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 DPM3Q9P2X0 92 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 AMMECR1Q9Y4X0 333 aaPredicted RBP16■□□□□ 0.15
R3HCC1-210ENST00000625275 MINOS1-NBL1R4GNA1 71 aa16■□□□□ 0.15
R3HCC1-210ENST00000625275 VGLL3A8MV65 326 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 LY6LH3BQJ8 138 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 J3QRK9 145 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 OR8U9P0C7N5 309 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 AKAIN1P0CW23 69 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 AADACP22760 399 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 RAB7AP51149 207 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 DHRS11Q6UWP2 260 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 DYNAPQ8N1N2 210 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 TOMM5Q8N4H5 51 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 OR4C16Q8NGL9 310 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 OR8U1Q8NH10 309 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 OR2T6Q8NHC8 308 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 PIFOQ8TCI5 191 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 GIMAP1Q8WWP7 306 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 CREB3L1Q96BA8 519 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 ABHD14BQ96IU4 210 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 CCDC32Q9BV29 185 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 NPFFR1Q9GZQ6 430 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 RNF150Q9ULK6 438 aa15.99■□□□□ 0.15
R3HCC1-210ENST00000625275 IGKV1D-13A0A0B4J2D9 117 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 LEUTXA8MZ59 168 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 PPYP01298 95 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 IGKV1-13P0DP09 117 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF137PP52743 207 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 TSPAN5P62079 268 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 DIAPH2-AS1Q14236 149 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 ST6GALNAC6Q969X2 333 aa15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF2Q9BSG1 426 aaPredicted RBP15.98■□□□□ 0.15
R3HCC1-210ENST00000625275 NOTCH3Q9UM47 2321 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 SAA2-SAA4A0A096LPE2 208 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 IFNA6P05013 189 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 SAA2P0DJI9 122 aaPredicted RBP15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 CEACAM3P40198 252 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 AP3S2P59780 193 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 MEF2DQ14814 521 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 SSX2Q16385 188 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 PLA1AQ53H76 456 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 TPTE2P1Q5T6R2 138 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF57Q68EA5 555 aaPredicted RBP15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 ARRDC1Q8N5I2 433 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 OR6F1Q8NGZ6 308 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 OR56B4Q8NH76 319 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 MALSU1Q96EH3 234 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 OR2D2Q9H210 308 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 RBM7Q9Y580 266 aaKnown RBP15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 HILPDAQ9Y5L2 63 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 AMY2AP04746 511 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 ZNF735P0CB33 412 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 IL3RAP26951 378 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 INPP1P49441 399 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 LUMP51884 338 aaPredicted RBP15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 FXYD4P59646 89 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 KLHDC1Q8N7A1 406 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 FAM110DQ8TAY7 271 aaPredicted RBP15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 RPEQ96AT9 228 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 PIPOXQ9P0Z9 390 aa15.97■□□□□ 0.15
R3HCC1-210ENST00000625275 TCF19Q9Y242 345 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms