RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TRAT1Q6PIZ9 186 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 CD177Q8N6Q3 437 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 TCTEX1D1Q8N7M0 179 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 TPRX1Q8N7U7 411 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 OR2Z1Q8NG97 314 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 CLDND2Q8NHS1 167 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 TCTEX1D2Q8WW35 142 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 PARD6GQ9BYG4 376 aaPredicted RBP6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 RBKSQ9H477 322 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 HSPB7Q9UBY9 170 aa6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 PUS1Q9Y606 427 aaKnown RBP eCLIP6.96□□□□□ -1.3
SND1-IT1-201ENST00000623342 INTS1Q8N201 2190 aaKnown RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 SPINT2O43291 252 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 PPIHO43447 177 aaKnown RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 CLDN1O95832 211 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 DAOP14920 347 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 PRDX2P32119 198 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 SSTR5P35346 364 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 G6PCP35575 357 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 RAB5BP61020 215 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNF66Q6ZN08 573 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 RPRMQ9NS64 109 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 KIAA2026Q5HYC2 2103 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 LRRC30A6NM36 301 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 C1orf196B1AJZ1 125 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 S1PR2O95136 353 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ADH4P08319 380 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 PTAFRP25105 342 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 HOXA1P49639 335 aaPredicted RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNF83P51522 516 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 BRWD1-AS2P59051 145 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 SERF2P84101 59 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 HTD2P86397 168 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 SLC38A11Q08AI6 406 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 KHDC3LQ587J8 217 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 TIMM23BQ5SRD1 257 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 BTNL3Q6UXE8 466 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 TMEM14EPQ6UXP3 125 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZFP82Q8N141 532 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 C2CD4CQ8TF44 421 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ISOC2Q96AB3 205 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 OR4C12Q96R67 309 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 HSD17B10Q99714 261 aaKnown RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 WDR61Q9GZS3 305 aaKnown RBP6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 DUSP13Q9UII6 198 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 LAMP3Q9UQV4 416 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 ICE1Q9Y2F5 2266 aa6.95□□□□□ -1.3
SND1-IT1-201ENST00000623342 IGHV3-43A0A0B4J1X8 118 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 A0A1W2PPH5 198 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ODAMA1E959 279 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 SRRM5B3KS81 715 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 H3BQ15 152 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 C15orf65H3BRN8 121 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 M0R1B8 84 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 RAB29O14966 203 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNF737O75373 536 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 CLDN14O95500 239 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 IGHV3-43DP0DP04 118 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 EGR1P18146 543 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 EDDM3AQ14507 147 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 HABP2Q14520 560 aaPredicted RBP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 EIF2S3LQ2VIR3 472 aaKnown RBP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNF474Q6S9Z5 364 aaPredicted RBP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 LRP11Q86VZ4 500 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 RFESDQ8TAC1 157 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 MBD3L1Q8WWY6 194 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 S100PBPQ96BU1 408 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 WASF3Q9UPY6 502 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 LOC102723971A0A1B0GUV8 181 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 IGHV3-13P01766 116 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ARG1P05089 322 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 CFHR2P36980 270 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 AKR1D1P51857 326 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 CEBPGP53567 150 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 Q3ZCU0 254 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 OR8G2PQ6IF36 304 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ALKBH2Q6NS38 261 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 Q6ZS92 163 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 H2BFWTQ7Z2G1 175 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 ZNF429Q86V71 674 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 EDARADDQ8WWZ3 215 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 PINX1Q96BK5 328 aaKnown RBP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 DCTN5Q9BTE1 182 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 VSIRQ9H7M9 311 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 SEBOXQ9HB31 216 aaPredicted RBP6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 PSG11Q9UQ72 335 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 FAM215AQ9Y5M1 114 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 CADP27708 2225 aa6.94□□□□□ -1.3
SND1-IT1-201ENST00000623342 UBE2L5PA0A1B0GUS4 154 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms